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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
303.9
nTPM
Monaco:
149.1
nTPM
Schmiedel:
107.7
TPM
T-CELLS - Annotated protein expression
Pending normal tissue analysis
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
303.9
HPA sample
nTPM
gdT-cell nTPM: 138.5
Samples: 6
Max nTPM: 161.9
Min nTPM: 99.6
P10809_1007
99.6
P10809_1022
148.7
P10809_1041
161.9
P10809_1060
141.5
P10809_1077
125.7
P10809_1098
153.3
MAIT T-cell nTPM: 143.8
Samples: 6
Max nTPM: 178.2
Min nTPM: 95.6
P10809_1006
95.6
P10809_1024
178.2
P10809_1043
137.1
P10809_1062
130.9
P10809_1083
152.2
P10809_1097
168.7
Memory CD4 T-cell nTPM: 192.2
Samples: 6
Max nTPM: 228.2
Min nTPM: 147.0
P10809_1014
147.0
P10809_1026
228.2
P10809_1045
203.8
P10809_1064
196.8
P10809_1086
191.0
P10809_1113
186.5
Memory CD8 T-cell nTPM: 178.1
Samples: 5
Max nTPM: 210.2
Min nTPM: 136.4
P10809_1012
136.4
P10809_1027
210.2
P10809_1046
181.5
P10809_1065
174.2
P10809_1111
188.1
Naive CD4 T-cell nTPM: 215.5
Samples: 6
Max nTPM: 308.7
Min nTPM: 140.5
P10809_1015
140.5
P10809_1030
228.1
P10809_1049
308.7
P10809_1068
211.2
P10809_1085
196.0
P10809_1112
208.2
Naive CD8 T-cell nTPM: 207.0
Samples: 6
Max nTPM: 253.1
Min nTPM: 153.3
P10809_1016
170.4
P10809_1031
253.1
P10809_1050
236.8
P10809_1069
209.6
P10809_1087
153.3
P10809_1110
218.7
T-reg nTPM: 303.9
Samples: 6
Max nTPM: 373.5
Min nTPM: 185.7
P10809_1018
185.7
P10809_1037
373.5
P10809_1056
357.0
P10809_1075
291.5
P10809_1094
306.7
P10809_1106
308.7
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
149.1
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 126.8
Samples: 4
Max nTPM: 169.5
Min nTPM: 80.8
RHH5202_R3573
134.4
RHH5230_R3602
80.8
RHH5259_R3631
122.6
RHH5288_R3660
169.5
Effector memory CD8 T-cell nTPM: 77.8
Samples: 4
Max nTPM: 104.2
Min nTPM: 60.2
RHH5203_R3574
104.2
RHH5231_R3603
64.7
RHH5260_R3632
82.2
RHH5289_R3661
60.2
MAIT T-cell nTPM: 82.8
Samples: 4
Max nTPM: 127.3
Min nTPM: 59.4
RHH5233_R3605
59.4
RHH5205_R3576
73.4
RHH5262_R3634
71.1
RHH5297_R3663
127.3
Memory CD4 T-cell TFH nTPM: 143.7
Samples: 4
Max nTPM: 184.1
Min nTPM: 106.2
RHH5300_R3666
134.9
RHH5236_R3608
184.1
RHH5265_R3637
106.2
RHH5208_R3579
149.5
Memory CD4 T-cell Th1 nTPM: 123.3
Samples: 4
Max nTPM: 162.3
Min nTPM: 82.2
RHH5210_R3581
104.6
RHH5302_R3668
162.3
RHH5238_R3610
82.2
RHH5267_R3639
144.1
Memory CD4 T-cell Th1/Th17 nTPM: 118.5
Samples: 4
Max nTPM: 140.8
Min nTPM: 70.8
RHH5303_R3669
140.8
RHH5211_R3582
137.2
RHH5239_R3611
70.8
RHH5268_R3640
125.2
Memory CD4 T-cell Th17 nTPM: 96.6
Samples: 4
Max nTPM: 111.2
Min nTPM: 77.4
RHH5304_R3670
111.2
RHH5212_R3583
102.8
RHH5240_R3612
77.4
RHH5269_R3641
94.9
Memory CD4 T-cell Th2 nTPM: 107.5
Samples: 4
Max nTPM: 141.1
Min nTPM: 79.3
RHH5305_R3671
141.1
RHH5213_R3584
79.3
RHH5241_R3613
111.3
RHH5270_R3642
98.4
Naive CD4 T-cell nTPM: 139.9
Samples: 4
Max nTPM: 188.1
Min nTPM: 104.0
RHH5306_R3672
136.1
RHH5214_R3585
188.1
RHH5242_R3614
104.0
RHH5271_R3643
131.4
Naive CD8 T-cell nTPM: 139.8
Samples: 4
Max nTPM: 177.3
Min nTPM: 98.4
RHH5201_R3572
177.3
RHH5229_R3601
98.4
RHH5258_R3630
151.0
RHH5287_R3659
132.6
Non-Vd2 gdTCR nTPM: 90.1
Samples: 4
Max nTPM: 120.9
Min nTPM: 56.2
RHH5235_R3607
56.2
RHH5264_R3636
120.9
RHH5207_R3578
80.6
RHH5299_R3665
102.5
T-reg nTPM: 149.1
Samples: 4
Max nTPM: 171.5
Min nTPM: 117.2
RHH5301_R3667
171.5
RHH5237_R3609
169.0
RHH5266_R3638
117.2
RHH5209_R3580
138.5
Terminal effector memory CD4 T-cell nTPM: 80.2
Samples: 2
Max nTPM: 104.8
Min nTPM: 55.6
RHH5243_R3615
55.6
RHH5272_R3644
104.8
Terminal effector memory CD8 T-cell nTPM: 113.1
Samples: 4
Max nTPM: 212.3
Min nTPM: 44.1
RHH5232_R3604
44.1
RHH5204_R3575
212.3
RHH5261_R3633
97.1
RHH5296_R3662
98.9
Vd2 gdTCR nTPM: 133.9
Samples: 4
Max nTPM: 185.0
Min nTPM: 80.8
RHH5234_R3606
80.8
RHH5206_R3577
185.0
RHH5263_R3635
102.0
RHH5298_R3664
167.8
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
