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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
98.4
nTPM
Monaco:
113.4
nTPM
Schmiedel:
61.2
TPM
T-CELLS - Annotated protein expression
Pending normal tissue analysis
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
98.4
HPA sample
nTPM
gdT-cell nTPM: 61.3
Samples: 6
Max nTPM: 81.4
Min nTPM: 40.2
P10809_1007
40.2
P10809_1022
81.4
P10809_1041
65.5
P10809_1060
52.7
P10809_1077
60.1
P10809_1098
67.6
MAIT T-cell nTPM: 59.7
Samples: 6
Max nTPM: 85.3
Min nTPM: 42.9
P10809_1006
44.4
P10809_1024
85.3
P10809_1043
62.1
P10809_1062
59.7
P10809_1083
42.9
P10809_1097
64.0
Memory CD4 T-cell nTPM: 66.0
Samples: 6
Max nTPM: 84.5
Min nTPM: 49.0
P10809_1014
49.0
P10809_1026
58.1
P10809_1045
84.5
P10809_1064
57.7
P10809_1086
73.8
P10809_1113
72.9
Memory CD8 T-cell nTPM: 68.8
Samples: 5
Max nTPM: 81.3
Min nTPM: 49.0
P10809_1012
49.0
P10809_1027
81.3
P10809_1046
79.3
P10809_1065
66.5
P10809_1111
67.9
Naive CD4 T-cell nTPM: 98.4
Samples: 6
Max nTPM: 127.9
Min nTPM: 56.5
P10809_1015
56.5
P10809_1030
122.9
P10809_1049
127.9
P10809_1068
103.4
P10809_1085
85.8
P10809_1112
93.6
Naive CD8 T-cell nTPM: 78.9
Samples: 6
Max nTPM: 118.7
Min nTPM: 53.3
P10809_1016
53.3
P10809_1031
118.7
P10809_1050
89.9
P10809_1069
77.3
P10809_1087
61.9
P10809_1110
72.5
T-reg nTPM: 63.9
Samples: 6
Max nTPM: 82.9
Min nTPM: 46.9
P10809_1018
46.9
P10809_1037
82.9
P10809_1056
63.1
P10809_1075
51.3
P10809_1094
65.6
P10809_1106
73.8
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
113.4
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 91.8
Samples: 4
Max nTPM: 117.1
Min nTPM: 72.2
RHH5202_R3573
72.2
RHH5230_R3602
117.1
RHH5259_R3631
86.6
RHH5288_R3660
91.3
Effector memory CD8 T-cell nTPM: 91.2
Samples: 4
Max nTPM: 93.8
Min nTPM: 85.5
RHH5203_R3574
93.8
RHH5231_R3603
85.5
RHH5260_R3632
93.1
RHH5289_R3661
92.4
MAIT T-cell nTPM: 84.3
Samples: 4
Max nTPM: 104.1
Min nTPM: 69.1
RHH5233_R3605
88.5
RHH5205_R3576
69.1
RHH5262_R3634
104.1
RHH5297_R3663
75.5
Memory CD4 T-cell TFH nTPM: 99.7
Samples: 4
Max nTPM: 121.2
Min nTPM: 74.4
RHH5300_R3666
84.4
RHH5236_R3608
121.2
RHH5265_R3637
118.7
RHH5208_R3579
74.4
Memory CD4 T-cell Th1 nTPM: 89.1
Samples: 4
Max nTPM: 96.3
Min nTPM: 73.7
RHH5210_R3581
96.3
RHH5302_R3668
90.7
RHH5238_R3610
73.7
RHH5267_R3639
95.7
Memory CD4 T-cell Th1/Th17 nTPM: 89.2
Samples: 4
Max nTPM: 101.8
Min nTPM: 75.7
RHH5303_R3669
101.8
RHH5211_R3582
75.7
RHH5239_R3611
83.1
RHH5268_R3640
96.2
Memory CD4 T-cell Th17 nTPM: 100.2
Samples: 4
Max nTPM: 136.0
Min nTPM: 86.2
RHH5304_R3670
91.7
RHH5212_R3583
86.8
RHH5240_R3612
136.0
RHH5269_R3641
86.2
Memory CD4 T-cell Th2 nTPM: 92.5
Samples: 4
Max nTPM: 105.8
Min nTPM: 83.3
RHH5305_R3671
105.8
RHH5213_R3584
83.3
RHH5241_R3613
88.9
RHH5270_R3642
92.1
Naive CD4 T-cell nTPM: 104.4
Samples: 4
Max nTPM: 110.6
Min nTPM: 88.4
RHH5306_R3672
108.9
RHH5214_R3585
109.5
RHH5242_R3614
88.4
RHH5271_R3643
110.6
Naive CD8 T-cell nTPM: 113.4
Samples: 4
Max nTPM: 145.4
Min nTPM: 80.8
RHH5201_R3572
91.7
RHH5229_R3601
80.8
RHH5258_R3630
145.4
RHH5287_R3659
135.8
Non-Vd2 gdTCR nTPM: 99.3
Samples: 4
Max nTPM: 114.3
Min nTPM: 90.6
RHH5235_R3607
101.5
RHH5264_R3636
114.3
RHH5207_R3578
90.6
RHH5299_R3665
90.9
T-reg nTPM: 77.8
Samples: 4
Max nTPM: 92.2
Min nTPM: 71.3
RHH5301_R3667
71.3
RHH5237_R3609
92.2
RHH5266_R3638
73.4
RHH5209_R3580
74.4
Terminal effector memory CD4 T-cell nTPM: 97.9
Samples: 2
Max nTPM: 118.5
Min nTPM: 77.2
RHH5243_R3615
77.2
RHH5272_R3644
118.5
Terminal effector memory CD8 T-cell nTPM: 81.7
Samples: 4
Max nTPM: 119.0
Min nTPM: 64.2
RHH5232_R3604
76.9
RHH5204_R3575
66.8
RHH5261_R3633
119.0
RHH5296_R3662
64.2
Vd2 gdTCR nTPM: 95.7
Samples: 4
Max nTPM: 116.8
Min nTPM: 72.8
RHH5234_R3606
99.4
RHH5206_R3577
72.8
RHH5263_R3635
116.8
RHH5298_R3664
93.8
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
