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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
13.6
nTPM
Monaco:
16.4
nTPM
Schmiedel:
60.4
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
13.6
HPA sample
nTPM
gdT-cell nTPM: 12.1
Samples: 6
Max nTPM: 16.9
Min nTPM: 6.5
P10809_1007
9.8
P10809_1022
16.9
P10809_1041
11.5
P10809_1060
13.5
P10809_1077
6.5
P10809_1098
14.3
MAIT T-cell nTPM: 9.1
Samples: 6
Max nTPM: 13.7
Min nTPM: 5.1
P10809_1006
5.1
P10809_1024
13.7
P10809_1043
10.9
P10809_1062
7.2
P10809_1083
11.2
P10809_1097
6.5
Memory CD4 T-cell nTPM: 9.9
Samples: 6
Max nTPM: 12.6
Min nTPM: 7.2
P10809_1014
7.2
P10809_1026
12.6
P10809_1045
10.1
P10809_1064
8.3
P10809_1086
9.0
P10809_1113
12.3
Memory CD8 T-cell nTPM: 11.3
Samples: 5
Max nTPM: 13.6
Min nTPM: 9.0
P10809_1012
13.6
P10809_1027
9.0
P10809_1046
12.6
P10809_1065
11.2
P10809_1111
10.3
Naive CD4 T-cell nTPM: 10.8
Samples: 6
Max nTPM: 17.1
Min nTPM: 5.0
P10809_1015
5.0
P10809_1030
9.8
P10809_1049
17.1
P10809_1068
7.9
P10809_1085
13.6
P10809_1112
11.1
Naive CD8 T-cell nTPM: 6.6
Samples: 6
Max nTPM: 11.2
Min nTPM: 2.7
P10809_1016
4.4
P10809_1031
6.5
P10809_1050
11.2
P10809_1069
2.7
P10809_1087
9.2
P10809_1110
5.8
T-reg nTPM: 13.6
Samples: 6
Max nTPM: 24.6
Min nTPM: 5.2
P10809_1018
11.3
P10809_1037
10.9
P10809_1056
24.6
P10809_1075
5.2
P10809_1094
10.3
P10809_1106
19.5
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
16.4
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 6.5
Samples: 4
Max nTPM: 11.1
Min nTPM: 1.6
RHH5202_R3573
8.5
RHH5230_R3602
11.1
RHH5259_R3631
1.6
RHH5288_R3660
4.9
Effector memory CD8 T-cell nTPM: 7.2
Samples: 4
Max nTPM: 10.8
Min nTPM: 2.9
RHH5203_R3574
6.5
RHH5231_R3603
10.8
RHH5260_R3632
2.9
RHH5289_R3661
8.7
MAIT T-cell nTPM: 9.2
Samples: 4
Max nTPM: 15.3
Min nTPM: 6.3
RHH5233_R3605
7.7
RHH5205_R3576
6.3
RHH5262_R3634
7.5
RHH5297_R3663
15.3
Memory CD4 T-cell TFH nTPM: 12.8
Samples: 4
Max nTPM: 25.3
Min nTPM: 6.7
RHH5300_R3666
6.9
RHH5236_R3608
25.3
RHH5265_R3637
12.1
RHH5208_R3579
6.7
Memory CD4 T-cell Th1 nTPM: 11.8
Samples: 4
Max nTPM: 17.6
Min nTPM: 4.3
RHH5210_R3581
17.6
RHH5302_R3668
17.2
RHH5238_R3610
4.3
RHH5267_R3639
7.9
Memory CD4 T-cell Th1/Th17 nTPM: 10.8
Samples: 4
Max nTPM: 21.1
Min nTPM: 4.5
RHH5303_R3669
9.7
RHH5211_R3582
21.1
RHH5239_R3611
4.5
RHH5268_R3640
7.9
Memory CD4 T-cell Th17 nTPM: 6.2
Samples: 4
Max nTPM: 11.8
Min nTPM: 3.1
RHH5304_R3670
4.1
RHH5212_R3583
11.8
RHH5240_R3612
5.6
RHH5269_R3641
3.1
Memory CD4 T-cell Th2 nTPM: 8.9
Samples: 4
Max nTPM: 15.6
Min nTPM: 5.4
RHH5305_R3671
5.4
RHH5213_R3584
15.6
RHH5241_R3613
8.5
RHH5270_R3642
6.2
Naive CD4 T-cell nTPM: 10.9
Samples: 4
Max nTPM: 15.5
Min nTPM: 6.2
RHH5306_R3672
11.8
RHH5214_R3585
15.5
RHH5242_R3614
10.0
RHH5271_R3643
6.2
Naive CD8 T-cell nTPM: 3.7
Samples: 4
Max nTPM: 7.4
Min nTPM: 2.0
RHH5201_R3572
2.5
RHH5229_R3601
2.9
RHH5258_R3630
7.4
RHH5287_R3659
2.0
Non-Vd2 gdTCR nTPM: 5.7
Samples: 4
Max nTPM: 12.6
Min nTPM: 1.4
RHH5235_R3607
6.0
RHH5264_R3636
12.6
RHH5207_R3578
1.4
RHH5299_R3665
2.7
T-reg nTPM: 11.1
Samples: 4
Max nTPM: 19.6
Min nTPM: 7.6
RHH5301_R3667
7.6
RHH5237_R3609
19.6
RHH5266_R3638
9.5
RHH5209_R3580
7.7
Terminal effector memory CD4 T-cell nTPM: 16.5
Samples: 2
Max nTPM: 19.5
Min nTPM: 13.4
RHH5243_R3615
13.4
RHH5272_R3644
19.5
Terminal effector memory CD8 T-cell nTPM: 8.8
Samples: 4
Max nTPM: 10.0
Min nTPM: 6.2
RHH5232_R3604
10.0
RHH5204_R3575
6.2
RHH5261_R3633
9.5
RHH5296_R3662
9.5
Vd2 gdTCR nTPM: 12.2
Samples: 4
Max nTPM: 25.3
Min nTPM: 2.6
RHH5234_R3606
2.7
RHH5206_R3577
25.3
RHH5263_R3635
2.6
RHH5298_R3664
18.3
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
