HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: High
Neuronal cells: High
RNA expressioni
Consensus:76.9 nTPM
HPA Brain:111.8 nTPM
GTEx:76.9 nTPM
FANTOM5:72.3 Scaled Tags Per Million
Mouse:8.6 nTPM
Allen mouse:1.5 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA024318
Glial cells High
Neuronal cells High


HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 111.8
Sample id Sample description nTPM
Hippocampus
nTPM: 98.3
1898 Male, age 80, left hemisphere 114.1
1855 Male, age 76, left hemisphere 98.8
2148 Female, age 91, left hemisphere 95.2
2529 Female, age 94, left hemisphere 94.8
1911 Female, age 85, right hemisphere 94.6
2621 Female, age 67, right hemisphere 92.2
Dentate gyrus
nTPM: 104.7
2530 Female, age 94, left hemisphere 114.0
1927 Female, age 91, both hemispheres 111.4
2010 Male, age 76, both hemispheres 108.5
2246 Female, age 85, both hemispheres 101.7
2528 Male, age 74, both hemispheres 96.5
2531 Female, age 67, both hemispheres 95.9
Entorhinal gyrus
nTPM: 108.8
2764 Male, age 80, right hemisphere 140.2
2613 Female, age 94, left hemisphere 120.3
1787 Male, age 76, left hemisphere 107.9
1938 Female, age 85, left hemisphere 106.8
2117 Female, age 91, right hemisphere 92.7
2686 Male, age 75, right hemisphere 85.0
Hippocampus, CA1
nTPM: 108.1
2749 Male, age 80, left hemisphere 128.5
2045 Male, age 76, both hemispheres 115.5
1873 Female, age 85, both hemispheres 111.6
2082 Female, age 91, right hemisphere 99.1
2527 Male, age 74, both hemispheres 85.9
Hippocampus, CA2
nTPM: 98.2
1963 Male, age 80, left hemisphere 116.2
1892 Male, age 76, both hemispheres 108.2
2249 Male, age 74, both hemispheres 99.9
1940 Female, age 85, left hemisphere 88.7
2437 Female, age 94, left hemisphere 88.4
2113 Female, age 91, right hemisphere 87.8
Hippocampus, CA3
nTPM: 104.8
2620 Female, age 94, left hemisphere 136.1
2137 Male, age 80, left hemisphere 109.6
2436 Male, age 74, both hemispheres 104.6
2861 Female, age 67, both hemispheres 100.0
1867 Male, age 76, both hemispheres 94.3
1891 Female, age 85, both hemispheres 84.2
Parahippocampal cortex
nTPM: 96.5
1933 Female, age 85, both hemispheres 113.0
1850 Male, age 80, both hemispheres 109.7
2245 Female, age 91, both hemispheres 104.9
2018 Male, age 76, both hemispheres 100.6
2532 Female, age 72, left hemisphere 99.4
1990 Female, age 91, right hemisphere 96.3
2622 Female, age 67, right hemisphere 91.0
2250 Female, age 67, right hemisphere 90.6
2693 Female, age 94, both hemispheres 83.1
2692 Male, age 74, both hemispheres 76.9
Perirhinal gyrus
nTPM: 111.8
1794 Male, age 80, right hemisphere 130.9
1847 Female, age 91, left hemisphere 124.1
1841 Female, age 85, right hemisphere 111.4
2848 Male, age 76, right hemisphere 96.6
2521 Female, age 94, right hemisphere 96.1
Subiculum
nTPM: 88.1
1977 Female, age 85, both hemispheres 109.7
1901 Male, age 80, both hemispheres 93.6
2042 Male, age 76, both hemispheres 88.0
2729 Female, age 91, right hemisphere 83.1
2619 Male, age 74, both hemispheres 82.5
2438 Female, age 94, left hemisphere 71.5

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 76.9
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 76.9
Samples: 197

Max nTPM: 128.9
Min nTPM: 39.1
Std nTPM: 17.1
Median nTPM: 74.8
GTEX-X585-0011-R1B-SM-46MVE 50-59 years, male 128.9
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 125.1
GTEX-1H1ZS-0011-R1b-SM-A9G1E 70-79 years, male 124.9
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 122.6
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 120.6
GTEX-1IY9M-0011-R1a-SM-EXURZ 60-69 years, male 119.3
GTEX-T5JC-0011-R1A-SM-32PM6 20-29 years, male 116.6
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 112.8
GTEX-1EX96-0011-R1a-SM-CE6R5 50-59 years, male 110.7
GTEX-1GZ2Q-0011-R1a-SM-CJI2Y 40-49 years, male 108.9
GTEX-1ICLZ-0011-R1b-SM-A9SM3 60-69 years, male 108.8
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 72.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 72.3
FF:10169-103B7 60 years, female 85.1
FF:10153-102I9 76 years, female 59.5

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 8.6
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 8.2
Samples: 4

Max nTPM: 9.2
Min nTPM: 7.6
Sample A Male 7.6
Sample B Male 7.8
Sample C Female 8.1
Sample D Female 9.2
Hippocampal formation
nTPM: 8.6
Samples: 4

Max nTPM: 10.0
Min nTPM: 7.1
Sample A Male 8.6
Sample B Male 10.0
Sample C Female 7.1
Sample D Female 8.8

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 1.5
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 1.5
70566106 Antisense, RP_050628_02_C09, Mouse strain C57BL/6J (56 days, male) 1.5

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