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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
84.7
nTPM
Monaco:
115.7
nTPM
Schmiedel:
30.8
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
84.7
HPA sample
nTPM
gdT-cell nTPM: 11.5
Samples: 6
Max nTPM: 14.6
Min nTPM: 9.4
P10809_1007
14.6
P10809_1022
12.6
P10809_1041
10.9
P10809_1060
9.4
P10809_1077
10.8
P10809_1098
10.5
MAIT T-cell nTPM: 84.7
Samples: 6
Max nTPM: 147.0
Min nTPM: 53.4
P10809_1006
147.0
P10809_1024
83.0
P10809_1043
60.1
P10809_1062
97.3
P10809_1083
67.4
P10809_1097
53.4
Memory CD4 T-cell nTPM: 22.7
Samples: 6
Max nTPM: 31.5
Min nTPM: 12.2
P10809_1014
31.5
P10809_1026
18.6
P10809_1045
27.7
P10809_1064
12.2
P10809_1086
23.0
P10809_1113
23.3
Memory CD8 T-cell nTPM: 19.0
Samples: 5
Max nTPM: 35.6
Min nTPM: 12.1
P10809_1012
35.6
P10809_1027
13.0
P10809_1046
17.9
P10809_1065
16.6
P10809_1111
12.1
Naive CD4 T-cell nTPM: 0.6
Samples: 6
Max nTPM: 1.9
Min nTPM: 0.1
P10809_1015
0.5
P10809_1030
0.8
P10809_1049
0.1
P10809_1068
0.2
P10809_1085
1.9
P10809_1112
0.3
Naive CD8 T-cell nTPM: 0.7
Samples: 6
Max nTPM: 1.6
Min nTPM: 0.0
P10809_1016
0.4
P10809_1031
0.0
P10809_1050
0.2
P10809_1069
1.6
P10809_1087
1.3
P10809_1110
0.6
T-reg nTPM: 10.7
Samples: 6
Max nTPM: 26.0
Min nTPM: 1.4
P10809_1018
25.1
P10809_1037
7.0
P10809_1056
2.8
P10809_1075
1.4
P10809_1094
26.0
P10809_1106
1.9
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
115.7
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 8.5
Samples: 4
Max nTPM: 19.0
Min nTPM: 0.1
RHH5202_R3573
12.6
RHH5230_R3602
0.1
RHH5259_R3631
19.0
RHH5288_R3660
2.1
Effector memory CD8 T-cell nTPM: 23.6
Samples: 4
Max nTPM: 38.5
Min nTPM: 4.6
RHH5203_R3574
38.5
RHH5231_R3603
4.6
RHH5260_R3632
29.4
RHH5289_R3661
21.9
MAIT T-cell nTPM: 115.7
Samples: 4
Max nTPM: 164.8
Min nTPM: 72.2
RHH5233_R3605
119.3
RHH5205_R3576
164.8
RHH5262_R3634
106.5
RHH5297_R3663
72.2
Memory CD4 T-cell TFH nTPM: 3.0
Samples: 4
Max nTPM: 3.6
Min nTPM: 1.8
RHH5300_R3666
3.6
RHH5236_R3608
3.3
RHH5265_R3637
3.2
RHH5208_R3579
1.8
Memory CD4 T-cell Th1 nTPM: 22.4
Samples: 4
Max nTPM: 33.3
Min nTPM: 11.8
RHH5210_R3581
11.8
RHH5302_R3668
18.0
RHH5238_R3610
26.3
RHH5267_R3639
33.3
Memory CD4 T-cell Th1/Th17 nTPM: 70.0
Samples: 4
Max nTPM: 91.8
Min nTPM: 52.3
RHH5303_R3669
59.1
RHH5211_R3582
91.8
RHH5239_R3611
52.3
RHH5268_R3640
76.7
Memory CD4 T-cell Th17 nTPM: 40.4
Samples: 4
Max nTPM: 54.3
Min nTPM: 29.3
RHH5304_R3670
54.3
RHH5212_R3583
29.5
RHH5240_R3612
29.3
RHH5269_R3641
48.6
Memory CD4 T-cell Th2 nTPM: 10.7
Samples: 4
Max nTPM: 20.1
Min nTPM: 0.6
RHH5305_R3671
4.8
RHH5213_R3584
17.3
RHH5241_R3613
0.6
RHH5270_R3642
20.1
Naive CD4 T-cell nTPM: 0.3
Samples: 4
Max nTPM: 1.2
Min nTPM: 0.0
RHH5306_R3672
1.2
RHH5214_R3585
0.0
RHH5242_R3614
0.0
RHH5271_R3643
0.0
Naive CD8 T-cell nTPM: 0.0
Samples: 4
Max nTPM: 0.0
Min nTPM: 0.0
RHH5201_R3572
0.0
RHH5229_R3601
0.0
RHH5258_R3630
0.0
RHH5287_R3659
0.0
Non-Vd2 gdTCR nTPM: 2.8
Samples: 4
Max nTPM: 8.3
Min nTPM: 0.0
RHH5235_R3607
8.3
RHH5264_R3636
0.1
RHH5207_R3578
2.7
RHH5299_R3665
0.0
T-reg nTPM: 14.8
Samples: 4
Max nTPM: 27.5
Min nTPM: 6.2
RHH5301_R3667
6.2
RHH5237_R3609
12.3
RHH5266_R3638
27.5
RHH5209_R3580
13.3
Terminal effector memory CD4 T-cell nTPM: 0.8
Samples: 2
Max nTPM: 1.5
Min nTPM: 0.0
RHH5243_R3615
0.0
RHH5272_R3644
1.5
Terminal effector memory CD8 T-cell nTPM: 2.3
Samples: 4
Max nTPM: 4.7
Min nTPM: 1.0
RHH5232_R3604
4.7
RHH5204_R3575
1.3
RHH5261_R3633
1.0
RHH5296_R3662
2.2
Vd2 gdTCR nTPM: 32.9
Samples: 4
Max nTPM: 55.3
Min nTPM: 15.9
RHH5234_R3606
42.9
RHH5206_R3577
15.9
RHH5263_R3635
55.3
RHH5298_R3664
17.6
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
