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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
36.8
nTPM
Monaco:
206.7
nTPM
Schmiedel:
67.0
TPM
T-CELLS - Annotated protein expression
Pending normal tissue analysis
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
36.8
HPA sample
nTPM
gdT-cell nTPM: 11.0
Samples: 6
Max nTPM: 12.6
Min nTPM: 9.8
P10809_1007
11.3
P10809_1022
12.1
P10809_1041
12.6
P10809_1060
10.1
P10809_1077
9.8
P10809_1098
9.9
MAIT T-cell nTPM: 15.0
Samples: 6
Max nTPM: 20.8
Min nTPM: 8.6
P10809_1006
20.8
P10809_1024
12.7
P10809_1043
8.6
P10809_1062
16.4
P10809_1083
12.9
P10809_1097
18.8
Memory CD4 T-cell nTPM: 30.5
Samples: 6
Max nTPM: 41.9
Min nTPM: 21.5
P10809_1014
41.9
P10809_1026
31.0
P10809_1045
27.7
P10809_1064
21.5
P10809_1086
25.4
P10809_1113
35.7
Memory CD8 T-cell nTPM: 16.8
Samples: 5
Max nTPM: 27.6
Min nTPM: 9.7
P10809_1012
27.6
P10809_1027
15.0
P10809_1046
9.7
P10809_1065
11.6
P10809_1111
20.2
Naive CD4 T-cell nTPM: 21.7
Samples: 6
Max nTPM: 34.3
Min nTPM: 16.4
P10809_1015
34.3
P10809_1030
17.1
P10809_1049
16.4
P10809_1068
20.2
P10809_1085
18.5
P10809_1112
23.7
Naive CD8 T-cell nTPM: 8.5
Samples: 6
Max nTPM: 12.6
Min nTPM: 5.2
P10809_1016
8.7
P10809_1031
9.3
P10809_1050
5.2
P10809_1069
8.7
P10809_1087
12.6
P10809_1110
6.4
T-reg nTPM: 36.8
Samples: 6
Max nTPM: 56.3
Min nTPM: 22.8
P10809_1018
29.5
P10809_1037
41.1
P10809_1056
34.6
P10809_1075
36.7
P10809_1094
22.8
P10809_1106
56.3
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
206.7
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 62.0
Samples: 4
Max nTPM: 89.2
Min nTPM: 40.3
RHH5202_R3573
40.3
RHH5230_R3602
60.5
RHH5259_R3631
57.8
RHH5288_R3660
89.2
Effector memory CD8 T-cell nTPM: 54.6
Samples: 4
Max nTPM: 57.9
Min nTPM: 48.7
RHH5203_R3574
48.7
RHH5231_R3603
57.9
RHH5260_R3632
56.6
RHH5289_R3661
55.2
MAIT T-cell nTPM: 47.6
Samples: 4
Max nTPM: 67.4
Min nTPM: 34.5
RHH5233_R3605
67.4
RHH5205_R3576
47.2
RHH5262_R3634
34.5
RHH5297_R3663
41.4
Memory CD4 T-cell TFH nTPM: 60.3
Samples: 4
Max nTPM: 95.6
Min nTPM: 38.6
RHH5300_R3666
48.7
RHH5236_R3608
95.6
RHH5265_R3637
58.3
RHH5208_R3579
38.6
Memory CD4 T-cell Th1 nTPM: 92.4
Samples: 4
Max nTPM: 115.7
Min nTPM: 75.8
RHH5210_R3581
76.6
RHH5302_R3668
115.7
RHH5238_R3610
75.8
RHH5267_R3639
101.3
Memory CD4 T-cell Th1/Th17 nTPM: 107.2
Samples: 4
Max nTPM: 135.9
Min nTPM: 62.0
RHH5303_R3669
130.6
RHH5211_R3582
135.9
RHH5239_R3611
62.0
RHH5268_R3640
100.4
Memory CD4 T-cell Th17 nTPM: 112.9
Samples: 4
Max nTPM: 135.0
Min nTPM: 90.5
RHH5304_R3670
96.5
RHH5212_R3583
129.6
RHH5240_R3612
135.0
RHH5269_R3641
90.5
Memory CD4 T-cell Th2 nTPM: 206.7
Samples: 4
Max nTPM: 241.6
Min nTPM: 160.6
RHH5305_R3671
241.6
RHH5213_R3584
237.8
RHH5241_R3613
160.6
RHH5270_R3642
186.9
Naive CD4 T-cell nTPM: 69.0
Samples: 4
Max nTPM: 78.9
Min nTPM: 56.7
RHH5306_R3672
78.9
RHH5214_R3585
64.5
RHH5242_R3614
56.7
RHH5271_R3643
75.8
Naive CD8 T-cell nTPM: 16.5
Samples: 4
Max nTPM: 30.1
Min nTPM: 11.0
RHH5201_R3572
13.6
RHH5229_R3601
11.4
RHH5258_R3630
30.1
RHH5287_R3659
11.0
Non-Vd2 gdTCR nTPM: 28.6
Samples: 4
Max nTPM: 37.8
Min nTPM: 18.1
RHH5235_R3607
18.1
RHH5264_R3636
37.8
RHH5207_R3578
25.0
RHH5299_R3665
33.3
T-reg nTPM: 70.0
Samples: 4
Max nTPM: 76.7
Min nTPM: 62.3
RHH5301_R3667
72.5
RHH5237_R3609
76.7
RHH5266_R3638
68.4
RHH5209_R3580
62.3
Terminal effector memory CD4 T-cell nTPM: 23.9
Samples: 2
Max nTPM: 36.7
Min nTPM: 11.1
RHH5243_R3615
11.1
RHH5272_R3644
36.7
Terminal effector memory CD8 T-cell nTPM: 26.6
Samples: 4
Max nTPM: 31.2
Min nTPM: 19.6
RHH5232_R3604
27.5
RHH5204_R3575
19.6
RHH5261_R3633
31.2
RHH5296_R3662
28.1
Vd2 gdTCR nTPM: 74.5
Samples: 4
Max nTPM: 109.3
Min nTPM: 62.8
RHH5234_R3606
63.1
RHH5206_R3577
62.9
RHH5263_R3635
109.3
RHH5298_R3664
62.8
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
