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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
114.3
nTPM
Monaco:
4321.3
nTPM
Schmiedel:
3838.8
TPM
T-CELLS - Annotated protein expression
Pending normal tissue analysis
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
114.3
HPA sample
nTPM
gdT-cell nTPM: 84.7
Samples: 6
Max nTPM: 175.3
Min nTPM: 39.2
P10809_1007
48.5
P10809_1022
175.3
P10809_1041
120.7
P10809_1060
82.4
P10809_1077
39.2
P10809_1098
42.1
MAIT T-cell nTPM: 68.4
Samples: 6
Max nTPM: 80.1
Min nTPM: 49.4
P10809_1006
77.4
P10809_1024
77.1
P10809_1043
80.1
P10809_1062
74.7
P10809_1083
49.4
P10809_1097
51.9
Memory CD4 T-cell nTPM: 77.3
Samples: 6
Max nTPM: 113.0
Min nTPM: 47.6
P10809_1014
73.1
P10809_1026
113.0
P10809_1045
85.9
P10809_1064
72.1
P10809_1086
47.6
P10809_1113
72.3
Memory CD8 T-cell nTPM: 80.8
Samples: 5
Max nTPM: 97.6
Min nTPM: 55.2
P10809_1012
70.3
P10809_1027
97.6
P10809_1046
93.0
P10809_1065
87.7
P10809_1111
55.2
Naive CD4 T-cell nTPM: 114.3
Samples: 6
Max nTPM: 135.3
Min nTPM: 82.5
P10809_1015
117.8
P10809_1030
135.3
P10809_1049
120.8
P10809_1068
119.3
P10809_1085
82.5
P10809_1112
110.0
Naive CD8 T-cell nTPM: 110.3
Samples: 6
Max nTPM: 165.4
Min nTPM: 43.3
P10809_1016
150.7
P10809_1031
165.4
P10809_1050
113.1
P10809_1069
73.7
P10809_1087
43.3
P10809_1110
115.5
T-reg nTPM: 76.5
Samples: 6
Max nTPM: 104.3
Min nTPM: 58.3
P10809_1018
64.5
P10809_1037
75.7
P10809_1056
104.3
P10809_1075
74.9
P10809_1094
58.3
P10809_1106
81.4
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
4321.3
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 2663.0
Samples: 4
Max nTPM: 4085.8
Min nTPM: 1456.2
RHH5202_R3573
4085.8
RHH5230_R3602
2821.1
RHH5259_R3631
1456.2
RHH5288_R3660
2288.8
Effector memory CD8 T-cell nTPM: 2460.3
Samples: 4
Max nTPM: 4282.9
Min nTPM: 1414.9
RHH5203_R3574
4282.9
RHH5231_R3603
2058.7
RHH5260_R3632
1414.9
RHH5289_R3661
2084.6
MAIT T-cell nTPM: 4321.3
Samples: 4
Max nTPM: 7200.8
Min nTPM: 2974.6
RHH5233_R3605
3988.7
RHH5205_R3576
7200.8
RHH5262_R3634
3121.1
RHH5297_R3663
2974.6
Memory CD4 T-cell TFH nTPM: 1868.4
Samples: 4
Max nTPM: 2887.5
Min nTPM: 1173.4
RHH5300_R3666
1963.1
RHH5236_R3608
1449.7
RHH5265_R3637
1173.4
RHH5208_R3579
2887.5
Memory CD4 T-cell Th1 nTPM: 1872.4
Samples: 4
Max nTPM: 2703.7
Min nTPM: 1253.6
RHH5210_R3581
2703.7
RHH5302_R3668
2171.1
RHH5238_R3610
1253.6
RHH5267_R3639
1361.1
Memory CD4 T-cell Th1/Th17 nTPM: 2209.1
Samples: 4
Max nTPM: 3589.5
Min nTPM: 1284.7
RHH5303_R3669
2481.2
RHH5211_R3582
3589.5
RHH5239_R3611
1284.7
RHH5268_R3640
1481.0
Memory CD4 T-cell Th17 nTPM: 1856.4
Samples: 4
Max nTPM: 2739.2
Min nTPM: 1187.7
RHH5304_R3670
2174.1
RHH5212_R3583
2739.2
RHH5240_R3612
1324.4
RHH5269_R3641
1187.7
Memory CD4 T-cell Th2 nTPM: 2052.5
Samples: 4
Max nTPM: 3099.4
Min nTPM: 1194.4
RHH5305_R3671
1840.6
RHH5213_R3584
3099.4
RHH5241_R3613
2075.4
RHH5270_R3642
1194.4
Naive CD4 T-cell nTPM: 1794.0
Samples: 4
Max nTPM: 2586.7
Min nTPM: 1225.3
RHH5306_R3672
1988.6
RHH5214_R3585
2586.7
RHH5242_R3614
1375.2
RHH5271_R3643
1225.3
Naive CD8 T-cell nTPM: 1900.8
Samples: 4
Max nTPM: 3237.2
Min nTPM: 1006.7
RHH5201_R3572
3237.2
RHH5229_R3601
1006.7
RHH5258_R3630
1517.1
RHH5287_R3659
1842.2
Non-Vd2 gdTCR nTPM: 2629.9
Samples: 4
Max nTPM: 4326.1
Min nTPM: 1584.7
RHH5235_R3607
2701.6
RHH5264_R3636
1584.7
RHH5207_R3578
4326.1
RHH5299_R3665
1907.3
T-reg nTPM: 2000.8
Samples: 4
Max nTPM: 2479.7
Min nTPM: 1583.6
RHH5301_R3667
2243.2
RHH5237_R3609
1696.7
RHH5266_R3638
1583.6
RHH5209_R3580
2479.7
Terminal effector memory CD4 T-cell nTPM: 1570.7
Samples: 2
Max nTPM: 1656.8
Min nTPM: 1484.5
RHH5243_R3615
1656.8
RHH5272_R3644
1484.5
Terminal effector memory CD8 T-cell nTPM: 2123.9
Samples: 4
Max nTPM: 2898.8
Min nTPM: 1313.5
RHH5232_R3604
2109.9
RHH5204_R3575
2898.8
RHH5261_R3633
1313.5
RHH5296_R3662
2173.3
Vd2 gdTCR nTPM: 3177.6
Samples: 4
Max nTPM: 4821.6
Min nTPM: 1909.3
RHH5234_R3606
3433.3
RHH5206_R3577
4821.6
RHH5263_R3635
1909.3
RHH5298_R3664
2546.3
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
