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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
11091.4
nTPM
Monaco:
2895.2
nTPM
Schmiedel:
177.4
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
11091.4
HPA sample
nTPM
gdT-cell nTPM: 5325.1
Samples: 6
Max nTPM: 6047.0
Min nTPM: 4521.2
P10809_1007
5666.2
P10809_1022
4633.2
P10809_1041
5910.7
P10809_1060
4521.2
P10809_1077
6047.0
P10809_1098
5172.5
MAIT T-cell nTPM: 8323.9
Samples: 6
Max nTPM: 9719.0
Min nTPM: 6874.6
P10809_1006
6874.6
P10809_1024
9719.0
P10809_1043
7278.6
P10809_1062
8189.9
P10809_1083
8492.2
P10809_1097
9389.1
Memory CD4 T-cell nTPM: 7979.5
Samples: 6
Max nTPM: 8707.9
Min nTPM: 6803.7
P10809_1014
8546.4
P10809_1026
8707.9
P10809_1045
8453.5
P10809_1064
6803.7
P10809_1086
7630.6
P10809_1113
7734.7
Memory CD8 T-cell nTPM: 6639.4
Samples: 5
Max nTPM: 6971.9
Min nTPM: 6178.8
P10809_1012
6271.0
P10809_1027
6967.0
P10809_1046
6808.3
P10809_1065
6178.8
P10809_1111
6971.9
Naive CD4 T-cell nTPM: 11091.4
Samples: 6
Max nTPM: 13020.8
Min nTPM: 9813.0
P10809_1015
11771.0
P10809_1030
13020.8
P10809_1049
10170.5
P10809_1068
11582.5
P10809_1085
9813.0
P10809_1112
10190.3
Naive CD8 T-cell nTPM: 9262.7
Samples: 6
Max nTPM: 12190.9
Min nTPM: 6727.8
P10809_1016
12190.9
P10809_1031
10678.1
P10809_1050
8746.8
P10809_1069
7992.9
P10809_1087
6727.8
P10809_1110
9239.5
T-reg nTPM: 5886.4
Samples: 6
Max nTPM: 7122.8
Min nTPM: 4692.5
P10809_1018
4692.5
P10809_1037
7122.8
P10809_1056
5349.2
P10809_1075
6054.7
P10809_1094
6436.9
P10809_1106
5662.1
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
2895.2
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 1760.8
Samples: 4
Max nTPM: 2463.0
Min nTPM: 917.4
RHH5202_R3573
917.4
RHH5230_R3602
1951.6
RHH5259_R3631
2463.0
RHH5288_R3660
1711.2
Effector memory CD8 T-cell nTPM: 924.8
Samples: 4
Max nTPM: 1550.9
Min nTPM: 619.6
RHH5203_R3574
619.6
RHH5231_R3603
873.6
RHH5260_R3632
1550.9
RHH5289_R3661
655.0
MAIT T-cell nTPM: 1597.1
Samples: 4
Max nTPM: 1767.5
Min nTPM: 1218.5
RHH5233_R3605
1218.5
RHH5205_R3576
1767.5
RHH5262_R3634
1708.8
RHH5297_R3663
1693.7
Memory CD4 T-cell TFH nTPM: 1505.3
Samples: 4
Max nTPM: 2347.8
Min nTPM: 1199.1
RHH5300_R3666
1261.4
RHH5236_R3608
2347.8
RHH5265_R3637
1213.0
RHH5208_R3579
1199.1
Memory CD4 T-cell Th1 nTPM: 2151.4
Samples: 4
Max nTPM: 3049.8
Min nTPM: 1126.9
RHH5210_R3581
1126.9
RHH5302_R3668
2239.5
RHH5238_R3610
3049.8
RHH5267_R3639
2189.4
Memory CD4 T-cell Th1/Th17 nTPM: 1979.5
Samples: 4
Max nTPM: 2654.2
Min nTPM: 1357.7
RHH5303_R3669
1759.8
RHH5211_R3582
1357.7
RHH5239_R3611
2146.4
RHH5268_R3640
2654.2
Memory CD4 T-cell Th17 nTPM: 1867.3
Samples: 4
Max nTPM: 2442.6
Min nTPM: 1282.7
RHH5304_R3670
2442.6
RHH5212_R3583
1282.7
RHH5240_R3612
2118.0
RHH5269_R3641
1626.0
Memory CD4 T-cell Th2 nTPM: 1857.0
Samples: 4
Max nTPM: 2724.6
Min nTPM: 1519.7
RHH5305_R3671
2724.6
RHH5213_R3584
1519.7
RHH5241_R3613
1592.7
RHH5270_R3642
1590.8
Naive CD4 T-cell nTPM: 2895.2
Samples: 4
Max nTPM: 3437.8
Min nTPM: 1932.2
RHH5306_R3672
3425.5
RHH5214_R3585
3437.8
RHH5242_R3614
1932.2
RHH5271_R3643
2785.2
Naive CD8 T-cell nTPM: 2594.7
Samples: 4
Max nTPM: 3732.0
Min nTPM: 1709.9
RHH5201_R3572
1709.9
RHH5229_R3601
3732.0
RHH5258_R3630
1907.9
RHH5287_R3659
3029.1
Non-Vd2 gdTCR nTPM: 1127.3
Samples: 4
Max nTPM: 1435.1
Min nTPM: 843.2
RHH5235_R3607
1435.1
RHH5264_R3636
1208.9
RHH5207_R3578
843.2
RHH5299_R3665
1021.9
T-reg nTPM: 1903.7
Samples: 4
Max nTPM: 2334.2
Min nTPM: 1530.0
RHH5301_R3667
1872.6
RHH5237_R3609
1530.0
RHH5266_R3638
1877.8
RHH5209_R3580
2334.2
Terminal effector memory CD4 T-cell nTPM: 1124.7
Samples: 2
Max nTPM: 1264.2
Min nTPM: 985.2
RHH5243_R3615
1264.2
RHH5272_R3644
985.2
Terminal effector memory CD8 T-cell nTPM: 1482.3
Samples: 4
Max nTPM: 2150.7
Min nTPM: 793.8
RHH5232_R3604
793.8
RHH5204_R3575
2150.7
RHH5261_R3633
1994.7
RHH5296_R3662
989.9
Vd2 gdTCR nTPM: 2216.4
Samples: 4
Max nTPM: 3376.2
Min nTPM: 1316.9
RHH5234_R3606
1316.9
RHH5206_R3577
3376.2
RHH5263_R3635
2154.4
RHH5298_R3664
2017.9
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.