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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
46.4
nTPM
Monaco:
142.2
nTPM
Schmiedel:
51.2
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
46.4
HPA sample
nTPM
gdT-cell nTPM: 18.9
Samples: 6
Max nTPM: 26.4
Min nTPM: 16.0
P10809_1007
16.5
P10809_1022
26.4
P10809_1041
16.8
P10809_1060
17.4
P10809_1077
20.2
P10809_1098
16.0
MAIT T-cell nTPM: 23.1
Samples: 6
Max nTPM: 30.4
Min nTPM: 15.3
P10809_1006
30.4
P10809_1024
22.2
P10809_1043
28.3
P10809_1062
18.5
P10809_1083
15.3
P10809_1097
23.7
Memory CD4 T-cell nTPM: 29.4
Samples: 6
Max nTPM: 37.0
Min nTPM: 19.8
P10809_1014
36.0
P10809_1026
29.0
P10809_1045
37.0
P10809_1064
19.8
P10809_1086
21.2
P10809_1113
33.4
Memory CD8 T-cell nTPM: 27.1
Samples: 5
Max nTPM: 31.0
Min nTPM: 22.3
P10809_1012
27.6
P10809_1027
27.6
P10809_1046
26.8
P10809_1065
22.3
P10809_1111
31.0
Naive CD4 T-cell nTPM: 46.4
Samples: 6
Max nTPM: 55.2
Min nTPM: 36.2
P10809_1015
43.3
P10809_1030
55.2
P10809_1049
54.8
P10809_1068
36.2
P10809_1085
43.0
P10809_1112
45.9
Naive CD8 T-cell nTPM: 37.2
Samples: 6
Max nTPM: 53.0
Min nTPM: 15.4
P10809_1016
43.2
P10809_1031
40.4
P10809_1050
32.5
P10809_1069
38.4
P10809_1087
15.4
P10809_1110
53.0
T-reg nTPM: 32.8
Samples: 6
Max nTPM: 47.0
Min nTPM: 24.1
P10809_1018
32.6
P10809_1037
24.1
P10809_1056
29.0
P10809_1075
39.4
P10809_1094
24.5
P10809_1106
47.0
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
142.2
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 122.9
Samples: 4
Max nTPM: 157.6
Min nTPM: 95.0
RHH5202_R3573
157.6
RHH5230_R3602
95.0
RHH5259_R3631
105.5
RHH5288_R3660
133.6
Effector memory CD8 T-cell nTPM: 73.8
Samples: 4
Max nTPM: 108.6
Min nTPM: 53.0
RHH5203_R3574
108.6
RHH5231_R3603
70.1
RHH5260_R3632
53.0
RHH5289_R3661
63.4
MAIT T-cell nTPM: 73.9
Samples: 4
Max nTPM: 80.0
Min nTPM: 61.3
RHH5233_R3605
74.3
RHH5205_R3576
80.0
RHH5262_R3634
61.3
RHH5297_R3663
79.8
Memory CD4 T-cell TFH nTPM: 142.2
Samples: 4
Max nTPM: 211.7
Min nTPM: 114.1
RHH5300_R3666
114.1
RHH5236_R3608
120.1
RHH5265_R3637
122.8
RHH5208_R3579
211.7
Memory CD4 T-cell Th1 nTPM: 124.9
Samples: 4
Max nTPM: 152.3
Min nTPM: 91.0
RHH5210_R3581
136.9
RHH5302_R3668
152.3
RHH5238_R3610
119.2
RHH5267_R3639
91.0
Memory CD4 T-cell Th1/Th17 nTPM: 89.6
Samples: 4
Max nTPM: 114.6
Min nTPM: 61.3
RHH5303_R3669
104.4
RHH5211_R3582
114.6
RHH5239_R3611
78.2
RHH5268_R3640
61.3
Memory CD4 T-cell Th17 nTPM: 96.6
Samples: 4
Max nTPM: 130.2
Min nTPM: 63.0
RHH5304_R3670
130.2
RHH5212_R3583
112.8
RHH5240_R3612
80.4
RHH5269_R3641
63.0
Memory CD4 T-cell Th2 nTPM: 125.5
Samples: 4
Max nTPM: 142.1
Min nTPM: 109.2
RHH5305_R3671
118.1
RHH5213_R3584
142.1
RHH5241_R3613
132.6
RHH5270_R3642
109.2
Naive CD4 T-cell nTPM: 136.9
Samples: 4
Max nTPM: 181.6
Min nTPM: 113.2
RHH5306_R3672
136.4
RHH5214_R3585
181.6
RHH5242_R3614
116.4
RHH5271_R3643
113.2
Naive CD8 T-cell nTPM: 135.8
Samples: 4
Max nTPM: 167.5
Min nTPM: 92.4
RHH5201_R3572
167.5
RHH5229_R3601
92.4
RHH5258_R3630
132.3
RHH5287_R3659
151.0
Non-Vd2 gdTCR nTPM: 61.4
Samples: 4
Max nTPM: 85.7
Min nTPM: 44.0
RHH5235_R3607
44.0
RHH5264_R3636
62.5
RHH5207_R3578
85.7
RHH5299_R3665
53.4
T-reg nTPM: 105.3
Samples: 4
Max nTPM: 122.0
Min nTPM: 80.6
RHH5301_R3667
112.4
RHH5237_R3609
106.1
RHH5266_R3638
80.6
RHH5209_R3580
122.0
Terminal effector memory CD4 T-cell nTPM: 60.2
Samples: 2
Max nTPM: 65.7
Min nTPM: 54.7
RHH5243_R3615
65.7
RHH5272_R3644
54.7
Terminal effector memory CD8 T-cell nTPM: 57.5
Samples: 4
Max nTPM: 69.8
Min nTPM: 42.0
RHH5232_R3604
69.8
RHH5204_R3575
66.6
RHH5261_R3633
51.5
RHH5296_R3662
42.0
Vd2 gdTCR nTPM: 63.3
Samples: 4
Max nTPM: 83.7
Min nTPM: 40.9
RHH5234_R3606
83.7
RHH5206_R3577
70.2
RHH5263_R3635
40.9
RHH5298_R3664
58.3
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
