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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
71.5
nTPM
Monaco:
321.7
nTPM
Schmiedel:
35.4
TPM
T-CELLS - Annotated protein expression
Pending normal tissue analysis
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
71.5
HPA sample
nTPM
gdT-cell nTPM: 71.5
Samples: 6
Max nTPM: 90.8
Min nTPM: 56.3
P10809_1007
56.3
P10809_1022
75.6
P10809_1041
90.8
P10809_1060
72.3
P10809_1077
64.3
P10809_1098
69.7
MAIT T-cell nTPM: 35.3
Samples: 6
Max nTPM: 44.5
Min nTPM: 26.3
P10809_1006
42.1
P10809_1024
44.5
P10809_1043
35.4
P10809_1062
27.8
P10809_1083
35.5
P10809_1097
26.3
Memory CD4 T-cell nTPM: 3.7
Samples: 6
Max nTPM: 8.1
Min nTPM: 0.7
P10809_1014
1.2
P10809_1026
1.4
P10809_1045
3.2
P10809_1064
7.7
P10809_1086
8.1
P10809_1113
0.7
Memory CD8 T-cell nTPM: 39.7
Samples: 5
Max nTPM: 48.3
Min nTPM: 30.0
P10809_1012
30.0
P10809_1027
44.6
P10809_1046
48.3
P10809_1065
37.7
P10809_1111
37.9
Naive CD4 T-cell nTPM: 5.4
Samples: 6
Max nTPM: 12.2
Min nTPM: 2.4
P10809_1015
3.0
P10809_1030
2.4
P10809_1049
12.2
P10809_1068
4.2
P10809_1085
6.7
P10809_1112
3.7
Naive CD8 T-cell nTPM: 36.1
Samples: 6
Max nTPM: 69.2
Min nTPM: 10.3
P10809_1016
10.3
P10809_1031
21.3
P10809_1050
41.8
P10809_1069
50.3
P10809_1087
69.2
P10809_1110
23.7
T-reg nTPM: 0.2
Samples: 6
Max nTPM: 0.5
Min nTPM: 0.0
P10809_1018
0.5
P10809_1037
0.0
P10809_1056
0.0
P10809_1075
0.1
P10809_1094
0.1
P10809_1106
0.2
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
321.7
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 41.6
Samples: 4
Max nTPM: 58.1
Min nTPM: 17.5
RHH5202_R3573
47.7
RHH5230_R3602
17.5
RHH5259_R3631
58.1
RHH5288_R3660
43.0
Effector memory CD8 T-cell nTPM: 180.0
Samples: 4
Max nTPM: 227.4
Min nTPM: 155.5
RHH5203_R3574
155.5
RHH5231_R3603
163.8
RHH5260_R3632
173.4
RHH5289_R3661
227.4
MAIT T-cell nTPM: 130.7
Samples: 4
Max nTPM: 153.0
Min nTPM: 97.7
RHH5233_R3605
97.7
RHH5205_R3576
153.0
RHH5262_R3634
143.3
RHH5297_R3663
128.6
Memory CD4 T-cell TFH nTPM: 4.7
Samples: 4
Max nTPM: 6.1
Min nTPM: 3.2
RHH5300_R3666
3.2
RHH5236_R3608
6.1
RHH5265_R3637
4.5
RHH5208_R3579
5.0
Memory CD4 T-cell Th1 nTPM: 10.9
Samples: 4
Max nTPM: 14.4
Min nTPM: 8.5
RHH5210_R3581
11.5
RHH5302_R3668
8.5
RHH5238_R3610
9.2
RHH5267_R3639
14.4
Memory CD4 T-cell Th1/Th17 nTPM: 9.3
Samples: 4
Max nTPM: 14.3
Min nTPM: 4.4
RHH5303_R3669
9.9
RHH5211_R3582
8.6
RHH5239_R3611
4.4
RHH5268_R3640
14.3
Memory CD4 T-cell Th17 nTPM: 7.8
Samples: 4
Max nTPM: 9.7
Min nTPM: 3.6
RHH5304_R3670
8.5
RHH5212_R3583
9.4
RHH5240_R3612
3.6
RHH5269_R3641
9.7
Memory CD4 T-cell Th2 nTPM: 7.0
Samples: 4
Max nTPM: 9.7
Min nTPM: 3.7
RHH5305_R3671
7.4
RHH5213_R3584
9.7
RHH5241_R3613
3.7
RHH5270_R3642
7.1
Naive CD4 T-cell nTPM: 8.4
Samples: 4
Max nTPM: 12.2
Min nTPM: 2.5
RHH5306_R3672
7.4
RHH5214_R3585
12.2
RHH5242_R3614
2.5
RHH5271_R3643
11.5
Naive CD8 T-cell nTPM: 23.8
Samples: 4
Max nTPM: 35.7
Min nTPM: 8.0
RHH5201_R3572
29.8
RHH5229_R3601
8.0
RHH5258_R3630
35.7
RHH5287_R3659
21.8
Non-Vd2 gdTCR nTPM: 321.7
Samples: 4
Max nTPM: 384.9
Min nTPM: 280.7
RHH5235_R3607
280.7
RHH5264_R3636
323.4
RHH5207_R3578
384.9
RHH5299_R3665
297.6
T-reg nTPM: 6.7
Samples: 4
Max nTPM: 9.1
Min nTPM: 4.8
RHH5301_R3667
5.3
RHH5237_R3609
7.4
RHH5266_R3638
4.8
RHH5209_R3580
9.1
Terminal effector memory CD4 T-cell nTPM: 158.9
Samples: 2
Max nTPM: 198.2
Min nTPM: 119.5
RHH5243_R3615
198.2
RHH5272_R3644
119.5
Terminal effector memory CD8 T-cell nTPM: 284.2
Samples: 4
Max nTPM: 312.6
Min nTPM: 257.9
RHH5232_R3604
257.9
RHH5204_R3575
312.6
RHH5261_R3633
300.3
RHH5296_R3662
265.8
Vd2 gdTCR nTPM: 165.7
Samples: 4
Max nTPM: 244.8
Min nTPM: 113.7
RHH5234_R3606
113.7
RHH5206_R3577
244.8
RHH5263_R3635
174.9
RHH5298_R3664
129.5
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
