HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:17.9 nTPM
HPA Brain:31.0 nTPM
GTEx:17.9 nTPM
FANTOM5:40.2 Scaled Tags Per Million
Pig:27.3 nTPM
Mouse:23.1 nTPM
Allen mouse:3.5 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA041725Antibody CAB032866
Glial cells Not detectedNot detected
Neuronal cells Not detectedNot detected




HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 31.0
Sample id Sample description nTPM
Hippocampus
nTPM: 30.1
1911 Female, age 85, right hemisphere 34.2
2529 Female, age 94, left hemisphere 31.6
1855 Male, age 76, left hemisphere 29.4
1898 Male, age 80, left hemisphere 29.0
2148 Female, age 91, left hemisphere 29.0
2621 Female, age 67, right hemisphere 27.5
Dentate gyrus
nTPM: 29.4
2531 Female, age 67, both hemispheres 31.5
2246 Female, age 85, both hemispheres 31.1
1927 Female, age 91, both hemispheres 30.5
2528 Male, age 74, both hemispheres 30.2
2530 Female, age 94, left hemisphere 27.4
2010 Male, age 76, both hemispheres 25.9
Entorhinal gyrus
nTPM: 29.0
2117 Female, age 91, right hemisphere 31.3
1938 Female, age 85, left hemisphere 30.5
2686 Male, age 75, right hemisphere 30.4
2613 Female, age 94, left hemisphere 29.5
2764 Male, age 80, right hemisphere 26.3
1787 Male, age 76, left hemisphere 26.2
Hippocampus, CA1
nTPM: 30.1
2045 Male, age 76, both hemispheres 33.1
2527 Male, age 74, both hemispheres 31.1
1873 Female, age 85, both hemispheres 31.0
2082 Female, age 91, right hemisphere 28.4
2749 Male, age 80, left hemisphere 26.7
Hippocampus, CA2
nTPM: 27.5
1940 Female, age 85, left hemisphere 31.9
2249 Male, age 74, both hemispheres 29.4
2113 Female, age 91, right hemisphere 28.2
1892 Male, age 76, both hemispheres 26.1
2437 Female, age 94, left hemisphere 26.0
1963 Male, age 80, left hemisphere 23.2
Hippocampus, CA3
nTPM: 30.6
1891 Female, age 85, both hemispheres 35.8
2620 Female, age 94, left hemisphere 33.8
1867 Male, age 76, both hemispheres 30.1
2861 Female, age 67, both hemispheres 29.7
2137 Male, age 80, left hemisphere 27.3
2436 Male, age 74, both hemispheres 26.7
Parahippocampal cortex
nTPM: 29.4
1933 Female, age 85, both hemispheres 32.3
2693 Female, age 94, both hemispheres 31.5
2692 Male, age 74, both hemispheres 30.1
2622 Female, age 67, right hemisphere 30.0
1850 Male, age 80, both hemispheres 29.8
2532 Female, age 72, left hemisphere 29.7
2245 Female, age 91, both hemispheres 29.4
1990 Female, age 91, right hemisphere 28.8
2250 Female, age 67, right hemisphere 28.5
2018 Male, age 76, both hemispheres 23.5
Perirhinal gyrus
nTPM: 31.0
1841 Female, age 85, right hemisphere 35.3
2848 Male, age 76, right hemisphere 31.6
1847 Female, age 91, left hemisphere 30.0
2521 Female, age 94, right hemisphere 29.4
1794 Male, age 80, right hemisphere 28.7
Subiculum
nTPM: 28.0
1901 Male, age 80, both hemispheres 30.2
1977 Female, age 85, both hemispheres 30.2
2729 Female, age 91, right hemisphere 28.6
2042 Male, age 76, both hemispheres 26.9
2619 Male, age 74, both hemispheres 26.5
2438 Female, age 94, left hemisphere 25.8

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 17.9
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 17.9
Samples: 197

Max nTPM: 48.3
Min nTPM: 11.6
Std nTPM: 4.0
Median nTPM: 17.2
GTEX-X4EP-0011-R1A-SM-3P624 60-69 years, female 48.3
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 32.3
GTEX-1A32A-0011-R1a-SM-7P8SQ 50-59 years, female 29.6
GTEX-1CAV2-0011-R1a-SM-ARZML 40-49 years, female 29.2
GTEX-NPJ8-0011-R1a-SM-33HCB 40-49 years, male 27.4
GTEX-14C5O-0011-R1b-SM-6AJBW 60-69 years, male 26.9
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 26.2
GTEX-1C6VQ-0011-R1a-SM-7P8Q2 50-59 years, male 26.1
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 25.7
GTEX-14BIM-0011-R1a-SM-69LQI 60-69 years, female 25.2
GTEX-1J1OQ-0011-R1a-SM-A9G1Z 40-49 years, female 24.7
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 40.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 40.2
FF:10153-102I9 76 years, female 46.1
FF:10169-103B7 60 years, female 34.2

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 27.3
Pig sample Sample description nTPM
Subiculum
nTPM: 26.5
Samples: 4

Max nTPM: 27.6
Min nTPM: 24.4
Sample A Female 26.7
Sample B Female 24.4
Sample C Male 27.3
Sample D Male 27.6
Dorsal hippocampus
nTPM: 27.3
Samples: 4

Max nTPM: 30.2
Min nTPM: 24.4
Sample A Female 24.4
Sample B Female 25.3
Sample C Male 30.2
Sample D Male 29.2
Entorhinal cortex
nTPM: 26.3
Samples: 4

Max nTPM: 28.5
Min nTPM: 23.5
Sample A Female 27.9
Sample B Female 23.5
Sample C Male 25.2
Sample D Male 28.5
Ventral hippocampus
nTPM: 25.7
Samples: 4

Max nTPM: 29.2
Min nTPM: 23.9
Sample A Female 25.0
Sample B Female 24.8
Sample C Male 23.9
Sample D Male 29.2

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 23.1
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 23.1
Samples: 4

Max nTPM: 24.1
Min nTPM: 22.7
Sample A Male 22.7
Sample B Male 22.7
Sample C Female 22.8
Sample D Female 24.1
Hippocampal formation
nTPM: 22.5
Samples: 4

Max nTPM: 25.3
Min nTPM: 20.3
Sample A Male 21.5
Sample B Male 25.3
Sample C Female 23.0
Sample D Female 20.3

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 3.5
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 3.5
170 Antisense, RP_Baylor_103000, Mouse strain C57BL/6J (56 days, male) 6.3
68410638 Antisense, RP_041214_02_C12, Mouse strain C57BL/6J (56 days, male) 0.7
171 Antisense, RP_Baylor_103000, Mouse strain C57BL/6J (56 days, male) 0.2

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