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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
126.8
nTPM
Monaco:
296.7
nTPM
Schmiedel:
176.8
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
126.8
HPA sample
nTPM
gdT-cell nTPM: 73.1
Samples: 6
Max nTPM: 107.1
Min nTPM: 24.0
P10809_1007
107.1
P10809_1022
79.0
P10809_1041
80.9
P10809_1060
24.0
P10809_1077
70.1
P10809_1098
77.2
MAIT T-cell nTPM: 75.2
Samples: 6
Max nTPM: 119.6
Min nTPM: 36.6
P10809_1006
119.6
P10809_1024
36.6
P10809_1043
96.8
P10809_1062
39.5
P10809_1083
57.0
P10809_1097
101.7
Memory CD4 T-cell nTPM: 92.8
Samples: 6
Max nTPM: 136.9
Min nTPM: 34.7
P10809_1014
136.9
P10809_1026
119.1
P10809_1045
124.6
P10809_1064
96.7
P10809_1086
44.7
P10809_1113
34.7
Memory CD8 T-cell nTPM: 100.5
Samples: 5
Max nTPM: 154.6
Min nTPM: 60.0
P10809_1012
154.6
P10809_1027
60.0
P10809_1046
124.9
P10809_1065
66.7
P10809_1111
96.5
Naive CD4 T-cell nTPM: 83.9
Samples: 6
Max nTPM: 114.4
Min nTPM: 62.1
P10809_1015
114.4
P10809_1030
81.0
P10809_1049
83.7
P10809_1068
78.1
P10809_1085
84.3
P10809_1112
62.1
Naive CD8 T-cell nTPM: 74.6
Samples: 6
Max nTPM: 114.3
Min nTPM: 29.9
P10809_1016
114.3
P10809_1031
71.4
P10809_1050
82.8
P10809_1069
65.0
P10809_1087
29.9
P10809_1110
84.3
T-reg nTPM: 126.8
Samples: 6
Max nTPM: 255.4
Min nTPM: 66.2
P10809_1018
121.7
P10809_1037
132.4
P10809_1056
255.4
P10809_1075
70.1
P10809_1094
66.2
P10809_1106
114.9
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
296.7
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 232.3
Samples: 4
Max nTPM: 371.5
Min nTPM: 100.0
RHH5202_R3573
100.0
RHH5230_R3602
371.5
RHH5259_R3631
294.4
RHH5288_R3660
163.4
Effector memory CD8 T-cell nTPM: 218.3
Samples: 4
Max nTPM: 336.8
Min nTPM: 81.6
RHH5203_R3574
179.9
RHH5231_R3603
336.8
RHH5260_R3632
274.8
RHH5289_R3661
81.6
MAIT T-cell nTPM: 206.5
Samples: 4
Max nTPM: 277.7
Min nTPM: 146.3
RHH5233_R3605
146.3
RHH5205_R3576
245.5
RHH5262_R3634
277.7
RHH5297_R3663
156.4
Memory CD4 T-cell TFH nTPM: 239.2
Samples: 4
Max nTPM: 343.6
Min nTPM: 115.4
RHH5300_R3666
304.3
RHH5236_R3608
343.6
RHH5265_R3637
193.3
RHH5208_R3579
115.4
Memory CD4 T-cell Th1 nTPM: 233.6
Samples: 4
Max nTPM: 316.1
Min nTPM: 153.2
RHH5210_R3581
155.5
RHH5302_R3668
153.2
RHH5238_R3610
316.1
RHH5267_R3639
309.7
Memory CD4 T-cell Th1/Th17 nTPM: 224.1
Samples: 4
Max nTPM: 315.5
Min nTPM: 93.5
RHH5303_R3669
93.5
RHH5211_R3582
315.5
RHH5239_R3611
221.9
RHH5268_R3640
265.3
Memory CD4 T-cell Th17 nTPM: 247.1
Samples: 4
Max nTPM: 361.7
Min nTPM: 148.1
RHH5304_R3670
148.1
RHH5212_R3583
361.7
RHH5240_R3612
168.2
RHH5269_R3641
310.4
Memory CD4 T-cell Th2 nTPM: 267.5
Samples: 4
Max nTPM: 348.9
Min nTPM: 143.6
RHH5305_R3671
245.7
RHH5213_R3584
331.8
RHH5241_R3613
143.6
RHH5270_R3642
348.9
Naive CD4 T-cell nTPM: 242.6
Samples: 4
Max nTPM: 282.6
Min nTPM: 190.0
RHH5306_R3672
269.2
RHH5214_R3585
282.6
RHH5242_R3614
190.0
RHH5271_R3643
228.5
Naive CD8 T-cell nTPM: 212.3
Samples: 4
Max nTPM: 280.5
Min nTPM: 94.8
RHH5201_R3572
94.8
RHH5229_R3601
248.0
RHH5258_R3630
225.7
RHH5287_R3659
280.5
Non-Vd2 gdTCR nTPM: 241.8
Samples: 4
Max nTPM: 400.2
Min nTPM: 139.4
RHH5235_R3607
400.2
RHH5264_R3636
139.4
RHH5207_R3578
143.1
RHH5299_R3665
284.6
T-reg nTPM: 296.7
Samples: 4
Max nTPM: 346.4
Min nTPM: 234.7
RHH5301_R3667
234.7
RHH5237_R3609
346.4
RHH5266_R3638
289.0
RHH5209_R3580
316.8
Terminal effector memory CD4 T-cell nTPM: 235.5
Samples: 2
Max nTPM: 323.7
Min nTPM: 147.3
RHH5243_R3615
323.7
RHH5272_R3644
147.3
Terminal effector memory CD8 T-cell nTPM: 204.9
Samples: 4
Max nTPM: 339.6
Min nTPM: 112.1
RHH5232_R3604
190.0
RHH5204_R3575
177.7
RHH5261_R3633
339.6
RHH5296_R3662
112.1
Vd2 gdTCR nTPM: 237.7
Samples: 4
Max nTPM: 278.0
Min nTPM: 203.4
RHH5234_R3606
278.0
RHH5206_R3577
203.4
RHH5263_R3635
230.7
RHH5298_R3664
238.8
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
