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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
1734.6
nTPM
Monaco:
3679.0
nTPM
Schmiedel:
2251.3
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
1734.6
HPA sample
nTPM
gdT-cell nTPM: 760.2
Samples: 6
Max nTPM: 990.5
Min nTPM: 616.4
P10809_1007
990.5
P10809_1022
711.5
P10809_1041
826.6
P10809_1060
616.4
P10809_1077
711.7
P10809_1098
704.7
MAIT T-cell nTPM: 1522.9
Samples: 6
Max nTPM: 1881.8
Min nTPM: 1271.2
P10809_1006
1881.8
P10809_1024
1623.1
P10809_1043
1298.7
P10809_1062
1466.1
P10809_1083
1271.2
P10809_1097
1596.2
Memory CD4 T-cell nTPM: 1389.4
Samples: 6
Max nTPM: 1913.3
Min nTPM: 978.4
P10809_1014
1913.3
P10809_1026
1570.8
P10809_1045
1510.5
P10809_1064
1024.7
P10809_1086
978.4
P10809_1113
1338.9
Memory CD8 T-cell nTPM: 1151.0
Samples: 5
Max nTPM: 1540.0
Min nTPM: 834.5
P10809_1012
1540.0
P10809_1027
1151.9
P10809_1046
1103.1
P10809_1065
834.5
P10809_1111
1125.3
Naive CD4 T-cell nTPM: 1734.6
Samples: 6
Max nTPM: 2655.2
Min nTPM: 1232.8
P10809_1015
2655.2
P10809_1030
1841.0
P10809_1049
1232.8
P10809_1068
1780.6
P10809_1085
1260.6
P10809_1112
1637.4
Naive CD8 T-cell nTPM: 1575.7
Samples: 6
Max nTPM: 2785.4
Min nTPM: 757.9
P10809_1016
2785.4
P10809_1031
1798.9
P10809_1050
1361.1
P10809_1069
1190.4
P10809_1087
757.9
P10809_1110
1560.7
T-reg nTPM: 1143.1
Samples: 6
Max nTPM: 1287.3
Min nTPM: 973.3
P10809_1018
1287.3
P10809_1037
1181.9
P10809_1056
973.3
P10809_1075
1066.6
P10809_1094
1199.4
P10809_1106
1149.9
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
3679.0
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 2607.9
Samples: 4
Max nTPM: 3871.2
Min nTPM: 1723.9
RHH5202_R3573
2721.7
RHH5230_R3602
2114.9
RHH5259_R3631
1723.9
RHH5288_R3660
3871.2
Effector memory CD8 T-cell nTPM: 1355.2
Samples: 4
Max nTPM: 1808.0
Min nTPM: 1004.1
RHH5203_R3574
1506.6
RHH5231_R3603
1808.0
RHH5260_R3632
1102.1
RHH5289_R3661
1004.1
MAIT T-cell nTPM: 2932.3
Samples: 4
Max nTPM: 4730.6
Min nTPM: 1662.0
RHH5233_R3605
2865.4
RHH5205_R3576
1662.0
RHH5262_R3634
2471.3
RHH5297_R3663
4730.6
Memory CD4 T-cell TFH nTPM: 3181.3
Samples: 4
Max nTPM: 3904.4
Min nTPM: 2604.1
RHH5300_R3666
3904.4
RHH5236_R3608
3125.0
RHH5265_R3637
2604.1
RHH5208_R3579
3091.8
Memory CD4 T-cell Th1 nTPM: 3077.6
Samples: 4
Max nTPM: 5262.3
Min nTPM: 1823.8
RHH5210_R3581
3253.1
RHH5302_R3668
5262.3
RHH5238_R3610
1971.0
RHH5267_R3639
1823.8
Memory CD4 T-cell Th1/Th17 nTPM: 2862.9
Samples: 4
Max nTPM: 4424.8
Min nTPM: 1701.3
RHH5303_R3669
4424.8
RHH5211_R3582
3227.3
RHH5239_R3611
1701.3
RHH5268_R3640
2098.1
Memory CD4 T-cell Th17 nTPM: 2353.6
Samples: 4
Max nTPM: 3230.0
Min nTPM: 1622.2
RHH5304_R3670
2820.1
RHH5212_R3583
3230.0
RHH5240_R3612
1622.2
RHH5269_R3641
1741.9
Memory CD4 T-cell Th2 nTPM: 3335.5
Samples: 4
Max nTPM: 4470.8
Min nTPM: 2322.9
RHH5305_R3671
3827.2
RHH5213_R3584
2721.2
RHH5241_R3613
4470.8
RHH5270_R3642
2322.9
Naive CD4 T-cell nTPM: 3679.0
Samples: 4
Max nTPM: 4846.7
Min nTPM: 2409.4
RHH5306_R3672
4846.7
RHH5214_R3585
3867.4
RHH5242_R3614
3592.4
RHH5271_R3643
2409.4
Naive CD8 T-cell nTPM: 3322.7
Samples: 4
Max nTPM: 4239.8
Min nTPM: 2330.2
RHH5201_R3572
3641.8
RHH5229_R3601
2330.2
RHH5258_R3630
4239.8
RHH5287_R3659
3078.9
Non-Vd2 gdTCR nTPM: 1670.3
Samples: 4
Max nTPM: 2446.2
Min nTPM: 1048.6
RHH5235_R3607
1048.6
RHH5264_R3636
1918.1
RHH5207_R3578
1268.1
RHH5299_R3665
2446.2
T-reg nTPM: 2816.0
Samples: 4
Max nTPM: 4642.6
Min nTPM: 1898.2
RHH5301_R3667
4642.6
RHH5237_R3609
2569.5
RHH5266_R3638
1898.2
RHH5209_R3580
2153.5
Terminal effector memory CD4 T-cell nTPM: 1746.5
Samples: 2
Max nTPM: 2519.2
Min nTPM: 973.8
RHH5243_R3615
973.8
RHH5272_R3644
2519.2
Terminal effector memory CD8 T-cell nTPM: 1975.9
Samples: 4
Max nTPM: 2637.2
Min nTPM: 1139.7
RHH5232_R3604
1692.0
RHH5204_R3575
2637.2
RHH5261_R3633
1139.7
RHH5296_R3662
2434.8
Vd2 gdTCR nTPM: 2808.2
Samples: 4
Max nTPM: 4070.1
Min nTPM: 1702.9
RHH5234_R3606
2384.9
RHH5206_R3577
3074.8
RHH5263_R3635
1702.9
RHH5298_R3664
4070.1
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.