HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
RNA expressioni
Consensus:41.2 nTPM
HPA Brain:98.5 nTPM
GTEx:41.2 nTPM
FANTOM5:86.0 Scaled Tags Per Million
Pig:35.9 nTPM
Mouse:94.1 nTPM
Allen mouse:10.0 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA040716
Glial cells Not detected
Neuronal cells Low



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 98.5
Sample id Sample description nTPM
Hippocampus
nTPM: 92.5
2621 Female, age 67, right hemisphere 121.3
2529 Female, age 94, left hemisphere 106.6
2148 Female, age 91, left hemisphere 89.0
1911 Female, age 85, right hemisphere 86.6
1855 Male, age 76, left hemisphere 80.3
1898 Male, age 80, left hemisphere 71.3
Dentate gyrus
nTPM: 80.3
2531 Female, age 67, both hemispheres 103.8
1927 Female, age 91, both hemispheres 87.5
2530 Female, age 94, left hemisphere 77.0
2528 Male, age 74, both hemispheres 72.5
2246 Female, age 85, both hemispheres 71.7
2010 Male, age 76, both hemispheres 69.0
Entorhinal gyrus
nTPM: 97.6
2613 Female, age 94, left hemisphere 147.5
2764 Male, age 80, right hemisphere 97.0
2686 Male, age 75, right hemisphere 91.9
1787 Male, age 76, left hemisphere 88.5
1938 Female, age 85, left hemisphere 83.8
2117 Female, age 91, right hemisphere 76.8
Hippocampus, CA1
nTPM: 86.8
2749 Male, age 80, left hemisphere 104.9
2527 Male, age 74, both hemispheres 94.9
2082 Female, age 91, right hemisphere 87.0
2045 Male, age 76, both hemispheres 77.5
1873 Female, age 85, both hemispheres 69.7
Hippocampus, CA2
nTPM: 81.7
2113 Female, age 91, right hemisphere 94.1
1963 Male, age 80, left hemisphere 90.7
2437 Female, age 94, left hemisphere 79.2
1940 Female, age 85, left hemisphere 79.1
1892 Male, age 76, both hemispheres 76.8
2249 Male, age 74, both hemispheres 70.1
Hippocampus, CA3
nTPM: 89.6
2861 Female, age 67, both hemispheres 116.1
2137 Male, age 80, left hemisphere 113.3
2620 Female, age 94, left hemisphere 100.4
1867 Male, age 76, both hemispheres 76.0
1891 Female, age 85, both hemispheres 66.6
2436 Male, age 74, both hemispheres 65.5
Parahippocampal cortex
nTPM: 94.1
2245 Female, age 91, both hemispheres 130.7
2622 Female, age 67, right hemisphere 119.4
2693 Female, age 94, both hemispheres 96.9
2532 Female, age 72, left hemisphere 91.8
2250 Female, age 67, right hemisphere 88.6
2018 Male, age 76, both hemispheres 86.2
2692 Male, age 74, both hemispheres 84.5
1850 Male, age 80, both hemispheres 81.6
1990 Female, age 91, right hemisphere 81.3
1933 Female, age 85, both hemispheres 80.1
Perirhinal gyrus
nTPM: 98.5
2521 Female, age 94, right hemisphere 125.8
1794 Male, age 80, right hemisphere 99.2
1847 Female, age 91, left hemisphere 92.0
1841 Female, age 85, right hemisphere 91.1
2848 Male, age 76, right hemisphere 84.4
Subiculum
nTPM: 77.1
2619 Male, age 74, both hemispheres 85.1
2042 Male, age 76, both hemispheres 81.7
1901 Male, age 80, both hemispheres 78.5
2438 Female, age 94, left hemisphere 77.0
1977 Female, age 85, both hemispheres 71.8
2729 Female, age 91, right hemisphere 68.3

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 41.2
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 41.2
Samples: 197

Max nTPM: 177.0
Min nTPM: 14.8
Std nTPM: 21.2
Median nTPM: 34.2
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 177.0
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 109.4
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 103.7
GTEX-WVLH-0011-R1A-SM-4MVOK 50-59 years, male 99.1
GTEX-13FLW-0011-R1b-SM-5LZX2 50-59 years, male 97.3
GTEX-1HSMO-0011-R1a-SM-CM2SV 60-69 years, male 95.9
GTEX-11EI6-0011-R1a-SM-DO93L 60-69 years, male 91.9
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 87.0
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 86.9
GTEX-1H3VE-0011-R1a-SM-A9G1K 40-49 years, male 84.7
GTEX-WL46-0011-R1A-SM-3LK6M 50-59 years, male 84.0
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 86.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 86.0
FF:10153-102I9 76 years, female 92.1
FF:10169-103B7 60 years, female 79.9

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 35.9
Pig sample Sample description nTPM
Subiculum
nTPM: 34.4
Samples: 4

Max nTPM: 44.2
Min nTPM: 27.5
Sample A Female 44.2
Sample B Female 31.4
Sample C Male 34.6
Sample D Male 27.5
Dorsal hippocampus
nTPM: 27.1
Samples: 4

Max nTPM: 30.1
Min nTPM: 21.9
Sample A Female 30.1
Sample B Female 27.6
Sample C Male 28.9
Sample D Male 21.9
Entorhinal cortex
nTPM: 35.9
Samples: 4

Max nTPM: 42.0
Min nTPM: 31.1
Sample A Female 35.3
Sample B Female 31.1
Sample C Male 42.0
Sample D Male 35.2
Ventral hippocampus
nTPM: 30.3
Samples: 4

Max nTPM: 44.7
Min nTPM: 23.1
Sample A Female 25.5
Sample B Female 23.1
Sample C Male 44.7
Sample D Male 28.0

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 94.1
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 94.1
Samples: 4

Max nTPM: 104.3
Min nTPM: 80.4
Sample A Male 104.3
Sample B Male 97.4
Sample C Female 80.4
Sample D Female 94.2
Hippocampal formation
nTPM: 73.9
Samples: 4

Max nTPM: 79.7
Min nTPM: 68.9
Sample A Male 71.7
Sample B Male 75.1
Sample C Female 68.9
Sample D Female 79.7

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 10.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 10.0
100143454 Antisense, RP_110407_01_C08, Mouse strain C57BL/6J (56 days, male) 10.0

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