HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: High
Neuronal cells: High
RNA expressioni
Consensus:341.6 nTPM
HPA Brain:35.5 nTPM
GTEx:341.6 nTPM
FANTOM5:695.8 Scaled Tags Per Million
Pig:202.7 nTPM
Mouse:410.3 nTPM
Allen mouse:0.0 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA001666Antibody CAB012403
Glial cells LowHigh
Neuronal cells HighHigh





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 35.5
Sample id Sample description nTPM
Hippocampus
nTPM: 32.8
1911 Female, age 85, right hemisphere 39.8
2529 Female, age 94, left hemisphere 39.4
1855 Male, age 76, left hemisphere 30.5
1898 Male, age 80, left hemisphere 30.3
2621 Female, age 67, right hemisphere 29.7
2148 Female, age 91, left hemisphere 27.3
Dentate gyrus
nTPM: 32.9
2530 Female, age 94, left hemisphere 46.3
2246 Female, age 85, both hemispheres 36.1
2531 Female, age 67, both hemispheres 32.6
2528 Male, age 74, both hemispheres 32.1
1927 Female, age 91, both hemispheres 28.8
2010 Male, age 76, both hemispheres 21.3
Entorhinal gyrus
nTPM: 29.9
2117 Female, age 91, right hemisphere 35.9
1938 Female, age 85, left hemisphere 33.8
2686 Male, age 75, right hemisphere 31.1
1787 Male, age 76, left hemisphere 27.0
2613 Female, age 94, left hemisphere 26.6
2764 Male, age 80, right hemisphere 25.2
Hippocampus, CA1
nTPM: 31.8
2527 Male, age 74, both hemispheres 39.3
1873 Female, age 85, both hemispheres 38.2
2749 Male, age 80, left hemisphere 31.1
2082 Female, age 91, right hemisphere 30.4
2045 Male, age 76, both hemispheres 20.0
Hippocampus, CA2
nTPM: 31.2
1940 Female, age 85, left hemisphere 37.9
2249 Male, age 74, both hemispheres 35.8
2113 Female, age 91, right hemisphere 33.0
2437 Female, age 94, left hemisphere 31.3
1892 Male, age 76, both hemispheres 24.9
1963 Male, age 80, left hemisphere 24.5
Hippocampus, CA3
nTPM: 32.9
1891 Female, age 85, both hemispheres 43.8
2436 Male, age 74, both hemispheres 36.4
2137 Male, age 80, left hemisphere 34.6
1867 Male, age 76, both hemispheres 34.0
2861 Female, age 67, both hemispheres 24.5
2620 Female, age 94, left hemisphere 23.9
Parahippocampal cortex
nTPM: 30.2
2245 Female, age 91, both hemispheres 36.6
1850 Male, age 80, both hemispheres 35.0
1990 Female, age 91, right hemisphere 34.7
1933 Female, age 85, both hemispheres 33.5
2692 Male, age 74, both hemispheres 33.5
2532 Female, age 72, left hemisphere 33.3
2250 Female, age 67, right hemisphere 32.1
2622 Female, age 67, right hemisphere 22.6
2018 Male, age 76, both hemispheres 21.8
2693 Female, age 94, both hemispheres 18.5
Perirhinal gyrus
nTPM: 30.0
2521 Female, age 94, right hemisphere 33.4
1841 Female, age 85, right hemisphere 32.9
2848 Male, age 76, right hemisphere 30.8
1847 Female, age 91, left hemisphere 27.3
1794 Male, age 80, right hemisphere 25.5
Subiculum
nTPM: 35.5
2438 Female, age 94, left hemisphere 47.4
1901 Male, age 80, both hemispheres 39.4
1977 Female, age 85, both hemispheres 33.6
2042 Male, age 76, both hemispheres 32.5
2619 Male, age 74, both hemispheres 31.8
2729 Female, age 91, right hemisphere 28.3

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 341.6
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 341.6
Samples: 197

Max nTPM: 635.2
Min nTPM: 233.1
Std nTPM: 56.4
Median nTPM: 336.1
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 635.2
GTEX-UTHO-0011-R1A-SM-3GIJO 60-69 years, male 532.7
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 503.2
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 491.6
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 474.7
GTEX-1F6IF-0011-R1b-SM-9WG78 60-69 years, male 471.7
GTEX-14LZ3-0011-R1a-SM-69LP5 60-69 years, female 470.8
GTEX-12WSH-0011-R1a-SM-5GU5V 50-59 years, male 470.6
GTEX-13QJC-0011-R1b-SM-5S2UU 60-69 years, female 467.2
GTEX-NPJ8-0011-R1a-SM-33HCB 40-49 years, male 461.8
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 448.7
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 695.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 695.8
FF:10153-102I9 76 years, female 790.3
FF:10169-103B7 60 years, female 601.3

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 202.7
Pig sample Sample description nTPM
Subiculum
nTPM: 199.7
Samples: 4

Max nTPM: 223.6
Min nTPM: 184.6
Sample A Female 223.6
Sample B Female 189.7
Sample C Male 184.6
Sample D Male 201.0
Dorsal hippocampus
nTPM: 202.7
Samples: 4

Max nTPM: 223.0
Min nTPM: 175.7
Sample A Female 211.1
Sample B Female 175.7
Sample C Male 223.0
Sample D Male 201.1
Entorhinal cortex
nTPM: 183.6
Samples: 4

Max nTPM: 199.9
Min nTPM: 168.0
Sample A Female 176.3
Sample B Female 199.9
Sample C Male 168.0
Sample D Male 190.1
Ventral hippocampus
nTPM: 182.6
Samples: 4

Max nTPM: 208.3
Min nTPM: 166.1
Sample A Female 176.8
Sample B Female 179.1
Sample C Male 166.1
Sample D Male 208.3

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 410.3
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 367.3
Samples: 4

Max nTPM: 375.7
Min nTPM: 357.6
Sample A Male 357.6
Sample B Male 375.7
Sample C Female 373.1
Sample D Female 362.9
Hippocampal formation
nTPM: 410.3
Samples: 4

Max nTPM: 424.6
Min nTPM: 397.4
Sample A Male 397.4
Sample B Male 424.6
Sample C Female 411.6
Sample D Female 407.7

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.0
71232819 Antisense, RP_050503_02_A04, Mouse strain C57BL/6J (56 days, male) 0.0

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