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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
127.2
nTPM
GTEx:
127.2
nTPM
FANTOM5:
561.7
Scaled Tags Per Million
Pig:
212.7
nTPM
Mouse:
593.3
nTPM
RETINA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
127.2
GTEx sample id
Sample description
nTPM
Retina Average nTPM: 127.2
Samples: 105
Max nTPM: 222.8
Min nTPM: 78.5
Std nTPM: 35.9
Median nTPM: 0.0
137_1
83 years, male
222.8
42_1
85 years, male
212.5
142_1
61 years, female
209.9
149_1
88 years, male
202.6
490_1
67 years, female
196.2
162_1
79 years, female
195.8
117_1
61 years, male
192.8
126_1
63 years, male
191.2
32_1
67 years, male
188.7
109_1
81 years, female
185.9
99_1
64 years, male
180.9
119_1
70 years, female
173.5
120_1
70 years, female
173.1
4_1
88 years, female
172.8
89_1
63 years, male
171.5
43_1
64 years, female
171.4
115_1
83 years, male
170.3
17_1
71 years, male
169.7
315_1
62 years, female
168.9
35_1
74 years, female
168.1
9_1
66 years, female
166.2
81_1
67 years, male
163.5
2_1
77 years, female
159.9
413_1
59 years, female
159.1
145_1
84 years, male
157.3
491_1
89 years, female
157.1
18_1
88 years, male
151.2
313_1
79 years, female
149.5
266_1
85 years, male
147.0
501_1
88 years, male
146.2
153_1
70 years, female
145.1
308_1
70 years, female
144.4
139_1
64 years, female
144.0
414_1
84 years, female
143.7
499_1
55 years, female
143.4
6_1
73 years, female
143.3
415_1
77 years, female
141.6
466_1
57 years, female
138.0
265_1
87 years, male
133.4
314_1
67 years, male
130.6
217_1
76 years, male
130.1
495_1
57 years, female
129.9
468_1
89 years, male
128.3
237_1
82 years, male
127.4
379_1
60 years, male
125.1
307_1
66 years, female
121.0
324_1
76 years, male
120.9
503_1
68 years, male
120.3
394_1
75 years, female
116.3
396_1
62 years, male
116.2
311_1
78 years, male
116.0
254_1
77 years, female
115.8
447_1
81 years, male
113.7
41_1
94 years, female
113.1
288_1
66 years, female
112.8
517_1
88 years, male
112.0
229_1
69 years, female
110.8
264_1
73 years, female
110.3
518_1
75 years, female
110.2
526_1
61 years, male
110.2
317_1
60 years, male
109.4
375_1
74 years, female
109.3
243_1
75 years, male
108.9
189_1
76 years, male
108.6
404_1
82 years, female
107.7
319_1
81 years, male
107.1
350_1
84 years, female
105.7
389_1
86 years, female
105.1
173_1
67 years, male
104.7
347_1
72 years, male
104.7
384_1
83 years, male
104.5
246_1
77 years, male
104.4
506_1
65 years, male
104.4
335_1
73 years, female
103.8
286_1
68 years, female
102.4
376_1
75 years, female
102.2
292_1
71 years, male
101.9
293_1
68 years, female
100.8
386_1
76 years, male
99.9
348_1
84 years, male
99.2
351_1
91 years, male
98.8
452_1
88 years, female
96.6
354_1
81 years, female
96.3
377_1
82 years, female
95.2
349_1
83 years, male
92.4
291_1
76 years, male
91.7
356_1
87 years, female
91.6
480_1
63 years, male
91.5
406_1
79 years, male
91.1
251_1
78 years, male
90.8
218_1
71 years, female
90.3
320_1
89 years, female
89.6
295_1
61 years, female
89.4
405_1
91 years, male
88.9
321_1
62 years, female
87.7
425_1
59 years, female
87.7
355_1
70 years, female
87.2
352_1
62 years, male
86.9
318_1
68 years, male
86.5
163_1
78 years, male
83.6
316_1
62 years, male
83.5
172_1
72 years, female
83.2
322_1
76 years, male
81.2
353_1
82 years, female
78.8
177_1
74 years, male
78.5
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RETINA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
