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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
168.8
nTPM
Monaco:
264.9
nTPM
Schmiedel:
117.0
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
168.8
HPA sample
nTPM
gdT-cell nTPM: 168.8
Samples: 6
Max nTPM: 212.5
Min nTPM: 139.4
P10809_1007
139.4
P10809_1022
183.5
P10809_1041
212.5
P10809_1060
144.4
P10809_1077
155.6
P10809_1098
177.1
MAIT T-cell nTPM: 89.3
Samples: 6
Max nTPM: 103.3
Min nTPM: 73.3
P10809_1006
73.3
P10809_1024
87.9
P10809_1043
103.3
P10809_1062
88.5
P10809_1083
89.7
P10809_1097
93.3
Memory CD4 T-cell nTPM: 114.7
Samples: 6
Max nTPM: 161.3
Min nTPM: 70.6
P10809_1014
70.6
P10809_1026
91.6
P10809_1045
119.3
P10809_1064
161.3
P10809_1086
146.2
P10809_1113
99.1
Memory CD8 T-cell nTPM: 108.2
Samples: 5
Max nTPM: 148.9
Min nTPM: 80.6
P10809_1012
80.6
P10809_1027
88.6
P10809_1046
122.5
P10809_1065
148.9
P10809_1111
100.3
Naive CD4 T-cell nTPM: 47.1
Samples: 6
Max nTPM: 98.0
Min nTPM: 22.1
P10809_1015
22.1
P10809_1030
34.4
P10809_1049
44.4
P10809_1068
42.3
P10809_1085
98.0
P10809_1112
41.6
Naive CD8 T-cell nTPM: 74.9
Samples: 6
Max nTPM: 150.0
Min nTPM: 25.6
P10809_1016
25.6
P10809_1031
50.2
P10809_1050
79.9
P10809_1069
89.8
P10809_1087
150.0
P10809_1110
54.1
T-reg nTPM: 132.6
Samples: 6
Max nTPM: 171.1
Min nTPM: 104.5
P10809_1018
104.5
P10809_1037
132.3
P10809_1056
133.1
P10809_1075
134.7
P10809_1094
171.1
P10809_1106
119.9
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
264.9
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 144.8
Samples: 4
Max nTPM: 176.9
Min nTPM: 117.1
RHH5202_R3573
150.6
RHH5230_R3602
176.9
RHH5259_R3631
117.1
RHH5288_R3660
134.5
Effector memory CD8 T-cell nTPM: 245.2
Samples: 4
Max nTPM: 292.2
Min nTPM: 200.5
RHH5203_R3574
200.5
RHH5231_R3603
268.9
RHH5260_R3632
219.1
RHH5289_R3661
292.2
MAIT T-cell nTPM: 166.1
Samples: 4
Max nTPM: 183.7
Min nTPM: 149.8
RHH5233_R3605
168.7
RHH5205_R3576
183.7
RHH5262_R3634
162.0
RHH5297_R3663
149.8
Memory CD4 T-cell TFH nTPM: 108.1
Samples: 4
Max nTPM: 143.2
Min nTPM: 85.8
RHH5300_R3666
108.3
RHH5236_R3608
143.2
RHH5265_R3637
95.0
RHH5208_R3579
85.8
Memory CD4 T-cell Th1 nTPM: 142.5
Samples: 4
Max nTPM: 176.7
Min nTPM: 112.8
RHH5210_R3581
145.7
RHH5302_R3668
176.7
RHH5238_R3610
112.8
RHH5267_R3639
134.6
Memory CD4 T-cell Th1/Th17 nTPM: 212.2
Samples: 4
Max nTPM: 274.4
Min nTPM: 162.3
RHH5303_R3669
274.4
RHH5211_R3582
247.5
RHH5239_R3611
164.5
RHH5268_R3640
162.3
Memory CD4 T-cell Th17 nTPM: 202.2
Samples: 4
Max nTPM: 238.0
Min nTPM: 176.2
RHH5304_R3670
189.2
RHH5212_R3583
205.2
RHH5240_R3612
238.0
RHH5269_R3641
176.2
Memory CD4 T-cell Th2 nTPM: 190.4
Samples: 4
Max nTPM: 206.4
Min nTPM: 169.2
RHH5305_R3671
184.2
RHH5213_R3584
201.6
RHH5241_R3613
169.2
RHH5270_R3642
206.4
Naive CD4 T-cell nTPM: 63.2
Samples: 4
Max nTPM: 73.3
Min nTPM: 52.7
RHH5306_R3672
68.5
RHH5214_R3585
73.3
RHH5242_R3614
58.2
RHH5271_R3643
52.7
Naive CD8 T-cell nTPM: 63.2
Samples: 4
Max nTPM: 77.4
Min nTPM: 49.5
RHH5201_R3572
69.0
RHH5229_R3601
49.5
RHH5258_R3630
77.4
RHH5287_R3659
57.0
Non-Vd2 gdTCR nTPM: 263.1
Samples: 4
Max nTPM: 318.9
Min nTPM: 235.9
RHH5235_R3607
250.9
RHH5264_R3636
235.9
RHH5207_R3578
318.9
RHH5299_R3665
246.7
T-reg nTPM: 151.9
Samples: 4
Max nTPM: 189.4
Min nTPM: 128.2
RHH5301_R3667
137.1
RHH5237_R3609
189.4
RHH5266_R3638
153.0
RHH5209_R3580
128.2
Terminal effector memory CD4 T-cell nTPM: 236.5
Samples: 2
Max nTPM: 255.8
Min nTPM: 217.1
RHH5243_R3615
255.8
RHH5272_R3644
217.1
Terminal effector memory CD8 T-cell nTPM: 264.9
Samples: 4
Max nTPM: 299.3
Min nTPM: 201.9
RHH5232_R3604
297.0
RHH5204_R3575
201.9
RHH5261_R3633
299.3
RHH5296_R3662
261.4
Vd2 gdTCR nTPM: 242.6
Samples: 4
Max nTPM: 309.2
Min nTPM: 188.9
RHH5234_R3606
222.1
RHH5206_R3577
309.2
RHH5263_R3635
250.0
RHH5298_R3664
188.9
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
