HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:185.4 nTPM
HPA Brain:116.6 nTPM
GTEx:185.4 nTPM
FANTOM5:285.9 Scaled Tags Per Million
Pig:113.1 nTPM
Mouse:255.9 nTPM
Allen mouse:12.1 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA050918Antibody HPA054667Antibody CAB002665
Glial cells Not detectedNot detectedNot detected
Neuronal cells Not detectedNot detectedNot detected







HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 116.6
Sample id Sample description nTPM
Hippocampus
nTPM: 107.3
1898 Male, age 80, left hemisphere 130.0
2621 Female, age 67, right hemisphere 108.6
1855 Male, age 76, left hemisphere 105.5
2148 Female, age 91, left hemisphere 105.4
2529 Female, age 94, left hemisphere 100.4
1911 Female, age 85, right hemisphere 93.8
Dentate gyrus
nTPM: 107.6
2530 Female, age 94, left hemisphere 135.6
2010 Male, age 76, both hemispheres 124.5
1927 Female, age 91, both hemispheres 115.2
2246 Female, age 85, both hemispheres 97.4
2531 Female, age 67, both hemispheres 86.8
2528 Male, age 74, both hemispheres 86.3
Entorhinal gyrus
nTPM: 104.1
2764 Male, age 80, right hemisphere 125.9
2117 Female, age 91, right hemisphere 111.4
1938 Female, age 85, left hemisphere 103.9
1787 Male, age 76, left hemisphere 103.7
2613 Female, age 94, left hemisphere 92.6
2686 Male, age 75, right hemisphere 87.4
Hippocampus, CA1
nTPM: 116.6
2749 Male, age 80, left hemisphere 185.0
2527 Male, age 74, both hemispheres 106.0
1873 Female, age 85, both hemispheres 101.3
2045 Male, age 76, both hemispheres 98.1
2082 Female, age 91, right hemisphere 92.8
Hippocampus, CA2
nTPM: 112.4
1963 Male, age 80, left hemisphere 142.0
1892 Male, age 76, both hemispheres 130.9
2249 Male, age 74, both hemispheres 109.2
1940 Female, age 85, left hemisphere 101.3
2437 Female, age 94, left hemisphere 96.5
2113 Female, age 91, right hemisphere 94.8
Hippocampus, CA3
nTPM: 104.0
2137 Male, age 80, left hemisphere 132.7
2436 Male, age 74, both hemispheres 119.8
1867 Male, age 76, both hemispheres 118.2
1891 Female, age 85, both hemispheres 87.9
2620 Female, age 94, left hemisphere 84.8
2861 Female, age 67, both hemispheres 80.7
Parahippocampal cortex
nTPM: 103.2
2245 Female, age 91, both hemispheres 124.1
2532 Female, age 72, left hemisphere 122.6
1850 Male, age 80, both hemispheres 117.5
1933 Female, age 85, both hemispheres 111.5
1990 Female, age 91, right hemisphere 103.1
2018 Male, age 76, both hemispheres 102.7
2250 Female, age 67, right hemisphere 100.5
2693 Female, age 94, both hemispheres 88.5
2692 Male, age 74, both hemispheres 83.1
2622 Female, age 67, right hemisphere 78.2
Perirhinal gyrus
nTPM: 116.4
1847 Female, age 91, left hemisphere 129.6
1794 Male, age 80, right hemisphere 124.6
2521 Female, age 94, right hemisphere 118.4
1841 Female, age 85, right hemisphere 112.3
2848 Male, age 76, right hemisphere 97.3
Subiculum
nTPM: 99.7
1977 Female, age 85, both hemispheres 112.9
1901 Male, age 80, both hemispheres 111.9
2042 Male, age 76, both hemispheres 99.9
2438 Female, age 94, left hemisphere 95.9
2619 Male, age 74, both hemispheres 93.4
2729 Female, age 91, right hemisphere 84.2

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 185.4
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 185.4
Samples: 197

Max nTPM: 338.2
Min nTPM: 100.9
Std nTPM: 38.1
Median nTPM: 182.6
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 338.2
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 325.4
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 286.9
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 286.1
GTEX-1EX96-0011-R1a-SM-CE6R5 50-59 years, male 265.3
GTEX-12WSH-0011-R1a-SM-5GU5V 50-59 years, male 259.2
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 258.9
GTEX-1AX9I-0011-R1b-SM-7RHG2 60-69 years, male 254.6
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 253.6
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 252.9
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 252.2
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 285.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 285.9
FF:10169-103B7 60 years, female 353.1
FF:10153-102I9 76 years, female 218.8

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 113.1
Pig sample Sample description nTPM
Subiculum
nTPM: 92.7
Samples: 4

Max nTPM: 121.0
Min nTPM: 78.9
Sample A Female 121.0
Sample B Female 84.5
Sample C Male 86.4
Sample D Male 78.9
Dorsal hippocampus
nTPM: 113.1
Samples: 4

Max nTPM: 155.1
Min nTPM: 87.7
Sample A Female 155.1
Sample B Female 110.4
Sample C Male 87.7
Sample D Male 99.3
Entorhinal cortex
nTPM: 96.0
Samples: 4

Max nTPM: 105.4
Min nTPM: 85.2
Sample A Female 103.9
Sample B Female 105.4
Sample C Male 89.4
Sample D Male 85.2
Ventral hippocampus
nTPM: 108.3
Samples: 4

Max nTPM: 127.0
Min nTPM: 73.4
Sample A Female 118.6
Sample B Female 73.4
Sample C Male 127.0
Sample D Male 114.1

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 255.9
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 247.1
Samples: 4

Max nTPM: 256.8
Min nTPM: 231.6
Sample A Male 231.6
Sample B Male 248.4
Sample C Female 256.8
Sample D Female 251.4
Hippocampal formation
nTPM: 256.0
Samples: 4

Max nTPM: 277.0
Min nTPM: 243.2
Sample A Male 277.0
Sample B Male 243.2
Sample C Female 254.5
Sample D Female 249.1

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 12.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 12.1
74819690 Antisense, RP_060315_02_H06, Mouse strain C57BL/6J (56 days, male) 12.3
69838610 Antisense, RP_050310_02_C09, Mouse strain C57BL/6J (56 days, male) 11.9

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