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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
164.4
nTPM
Monaco:
91.6
nTPM
Schmiedel:
64.6
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
164.4
HPA sample
nTPM
gdT-cell nTPM: 98.0
Samples: 6
Max nTPM: 122.7
Min nTPM: 69.2
P10809_1007
94.1
P10809_1022
122.7
P10809_1041
119.5
P10809_1060
69.2
P10809_1077
87.2
P10809_1098
95.4
MAIT T-cell nTPM: 103.0
Samples: 6
Max nTPM: 125.2
Min nTPM: 84.3
P10809_1006
84.3
P10809_1024
106.2
P10809_1043
96.6
P10809_1062
102.1
P10809_1083
103.8
P10809_1097
125.2
Memory CD4 T-cell nTPM: 106.1
Samples: 6
Max nTPM: 133.0
Min nTPM: 85.9
P10809_1014
85.9
P10809_1026
133.0
P10809_1045
125.7
P10809_1064
107.7
P10809_1086
90.7
P10809_1113
93.4
Memory CD8 T-cell nTPM: 100.9
Samples: 5
Max nTPM: 111.5
Min nTPM: 85.6
P10809_1012
85.6
P10809_1027
101.0
P10809_1046
111.5
P10809_1065
100.0
P10809_1111
106.6
Naive CD4 T-cell nTPM: 93.8
Samples: 6
Max nTPM: 113.4
Min nTPM: 79.6
P10809_1015
84.5
P10809_1030
79.6
P10809_1049
101.4
P10809_1068
94.1
P10809_1085
113.4
P10809_1112
89.6
Naive CD8 T-cell nTPM: 82.8
Samples: 6
Max nTPM: 89.8
Min nTPM: 77.0
P10809_1016
85.0
P10809_1031
80.2
P10809_1050
77.0
P10809_1069
80.9
P10809_1087
84.0
P10809_1110
89.8
T-reg nTPM: 164.5
Samples: 6
Max nTPM: 200.1
Min nTPM: 137.4
P10809_1018
137.4
P10809_1037
148.7
P10809_1056
164.1
P10809_1075
147.7
P10809_1094
200.1
P10809_1106
188.7
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
91.6
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 56.9
Samples: 4
Max nTPM: 89.3
Min nTPM: 44.6
RHH5202_R3573
47.5
RHH5230_R3602
44.6
RHH5259_R3631
46.3
RHH5288_R3660
89.3
Effector memory CD8 T-cell nTPM: 55.4
Samples: 4
Max nTPM: 84.7
Min nTPM: 34.1
RHH5203_R3574
84.7
RHH5231_R3603
59.0
RHH5260_R3632
43.9
RHH5289_R3661
34.1
MAIT T-cell nTPM: 55.3
Samples: 4
Max nTPM: 79.2
Min nTPM: 39.4
RHH5233_R3605
48.3
RHH5205_R3576
39.4
RHH5262_R3634
54.4
RHH5297_R3663
79.2
Memory CD4 T-cell TFH nTPM: 72.6
Samples: 4
Max nTPM: 83.5
Min nTPM: 46.9
RHH5300_R3666
83.5
RHH5236_R3608
81.0
RHH5265_R3637
79.0
RHH5208_R3579
46.9
Memory CD4 T-cell Th1 nTPM: 74.6
Samples: 4
Max nTPM: 127.2
Min nTPM: 34.5
RHH5210_R3581
79.4
RHH5302_R3668
127.2
RHH5238_R3610
34.5
RHH5267_R3639
57.3
Memory CD4 T-cell Th1/Th17 nTPM: 64.0
Samples: 4
Max nTPM: 86.7
Min nTPM: 38.3
RHH5303_R3669
71.7
RHH5211_R3582
86.7
RHH5239_R3611
38.3
RHH5268_R3640
59.2
Memory CD4 T-cell Th17 nTPM: 57.1
Samples: 4
Max nTPM: 90.1
Min nTPM: 26.6
RHH5304_R3670
58.3
RHH5212_R3583
90.1
RHH5240_R3612
26.6
RHH5269_R3641
53.5
Memory CD4 T-cell Th2 nTPM: 72.2
Samples: 4
Max nTPM: 86.7
Min nTPM: 57.0
RHH5305_R3671
86.7
RHH5213_R3584
57.0
RHH5241_R3613
75.9
RHH5270_R3642
69.0
Naive CD4 T-cell nTPM: 65.9
Samples: 4
Max nTPM: 76.8
Min nTPM: 56.7
RHH5306_R3672
76.8
RHH5214_R3585
72.2
RHH5242_R3614
58.0
RHH5271_R3643
56.7
Naive CD8 T-cell nTPM: 53.9
Samples: 4
Max nTPM: 98.3
Min nTPM: 20.6
RHH5201_R3572
34.8
RHH5229_R3601
20.6
RHH5258_R3630
98.3
RHH5287_R3659
61.9
Non-Vd2 gdTCR nTPM: 72.9
Samples: 4
Max nTPM: 97.9
Min nTPM: 44.5
RHH5235_R3607
44.5
RHH5264_R3636
97.9
RHH5207_R3578
63.2
RHH5299_R3665
85.8
T-reg nTPM: 91.6
Samples: 4
Max nTPM: 127.5
Min nTPM: 74.8
RHH5301_R3667
127.5
RHH5237_R3609
86.7
RHH5266_R3638
74.8
RHH5209_R3580
77.2
Terminal effector memory CD4 T-cell nTPM: 65.0
Samples: 2
Max nTPM: 85.1
Min nTPM: 44.9
RHH5243_R3615
44.9
RHH5272_R3644
85.1
Terminal effector memory CD8 T-cell nTPM: 62.5
Samples: 4
Max nTPM: 99.5
Min nTPM: 42.5
RHH5232_R3604
45.9
RHH5204_R3575
99.5
RHH5261_R3633
42.5
RHH5296_R3662
62.2
Vd2 gdTCR nTPM: 73.0
Samples: 4
Max nTPM: 102.8
Min nTPM: 45.8
RHH5234_R3606
57.3
RHH5206_R3577
102.8
RHH5263_R3635
45.8
RHH5298_R3664
86.1
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
