HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:63.8 nTPM
HPA Brain:26.6 nTPM
GTEx:63.8 nTPM
FANTOM5:257.2 Scaled Tags Per Million
Pig:13.2 nTPM
Mouse:17.9 nTPM
Allen mouse:0.0 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA000759
Glial cells High
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 26.6
Sample id Sample description nTPM
Hippocampus
nTPM: 26.1
1898 Male, age 80, left hemisphere 31.0
2621 Female, age 67, right hemisphere 29.6
1855 Male, age 76, left hemisphere 28.5
1911 Female, age 85, right hemisphere 25.3
2529 Female, age 94, left hemisphere 24.7
2148 Female, age 91, left hemisphere 17.2
Dentate gyrus
nTPM: 26.6
2010 Male, age 76, both hemispheres 49.9
2530 Female, age 94, left hemisphere 29.4
2528 Male, age 74, both hemispheres 23.0
2531 Female, age 67, both hemispheres 22.2
1927 Female, age 91, both hemispheres 20.3
2246 Female, age 85, both hemispheres 14.7
Entorhinal gyrus
nTPM: 17.6
1787 Male, age 76, left hemisphere 29.7
2117 Female, age 91, right hemisphere 23.6
2686 Male, age 75, right hemisphere 15.5
1938 Female, age 85, left hemisphere 14.8
2764 Male, age 80, right hemisphere 11.9
2613 Female, age 94, left hemisphere 9.8
Hippocampus, CA1
nTPM: 22.6
2045 Male, age 76, both hemispheres 36.0
1873 Female, age 85, both hemispheres 22.8
2527 Male, age 74, both hemispheres 18.2
2082 Female, age 91, right hemisphere 18.1
2749 Male, age 80, left hemisphere 18.0
Hippocampus, CA2
nTPM: 26.4
1892 Male, age 76, both hemispheres 30.9
2437 Female, age 94, left hemisphere 30.6
1940 Female, age 85, left hemisphere 29.5
1963 Male, age 80, left hemisphere 25.1
2249 Male, age 74, both hemispheres 22.3
2113 Female, age 91, right hemisphere 19.8
Hippocampus, CA3
nTPM: 25.8
1867 Male, age 76, both hemispheres 45.0
2861 Female, age 67, both hemispheres 28.4
2137 Male, age 80, left hemisphere 23.3
2436 Male, age 74, both hemispheres 23.3
1891 Female, age 85, both hemispheres 23.1
2620 Female, age 94, left hemisphere 11.7
Parahippocampal cortex
nTPM: 20.7
2018 Male, age 76, both hemispheres 59.2
2250 Female, age 67, right hemisphere 27.7
1990 Female, age 91, right hemisphere 18.9
2245 Female, age 91, both hemispheres 17.1
1850 Male, age 80, both hemispheres 16.4
1933 Female, age 85, both hemispheres 15.2
2693 Female, age 94, both hemispheres 14.2
2532 Female, age 72, left hemisphere 13.7
2622 Female, age 67, right hemisphere 13.5
2692 Male, age 74, both hemispheres 10.7
Perirhinal gyrus
nTPM: 18.6
1841 Female, age 85, right hemisphere 23.0
2521 Female, age 94, right hemisphere 22.2
2848 Male, age 76, right hemisphere 16.9
1847 Female, age 91, left hemisphere 16.2
1794 Male, age 80, right hemisphere 14.9
Subiculum
nTPM: 24.7
2042 Male, age 76, both hemispheres 51.8
2729 Female, age 91, right hemisphere 22.8
1901 Male, age 80, both hemispheres 20.4
2438 Female, age 94, left hemisphere 19.4
2619 Male, age 74, both hemispheres 18.2
1977 Female, age 85, both hemispheres 15.5

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 63.8
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 63.8
Samples: 197

Max nTPM: 326.3
Min nTPM: 8.3
Std nTPM: 52.8
Median nTPM: 47.7
GTEX-X4EP-0011-R1A-SM-3P624 60-69 years, female 326.3
GTEX-1CAV2-0011-R1a-SM-ARZML 40-49 years, female 305.0
GTEX-13RTL-0011-R1a-SM-5PNZ8 40-49 years, male 300.3
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 226.8
GTEX-NPJ8-0011-R1a-SM-33HCB 40-49 years, male 213.1
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 207.2
GTEX-13N1W-0011-R1b-SM-5MR4T 70-79 years, male 193.6
GTEX-16YQH-0011-R1a-SM-7LT8R 30-39 years, male 189.4
GTEX-16XZZ-0011-R1a-SM-7LTAH 60-69 years, male 170.2
GTEX-13OVJ-0011-R1b-SM-5L3I6 50-59 years, female 162.6
GTEX-1GN73-0011-R1a-SM-CKZNT 60-69 years, male 157.4
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 257.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 257.2
FF:10169-103B7 60 years, female 395.6
FF:10153-102I9 76 years, female 118.8

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 13.2
Pig sample Sample description nTPM
Subiculum
nTPM: 13.2
Samples: 4

Max nTPM: 15.3
Min nTPM: 11.2
Sample A Female 11.2
Sample B Female 11.5
Sample C Male 14.6
Sample D Male 15.3
Dorsal hippocampus
nTPM: 11.2
Samples: 4

Max nTPM: 17.8
Min nTPM: 7.9
Sample A Female 8.7
Sample B Female 7.9
Sample C Male 17.8
Sample D Male 10.5
Entorhinal cortex
nTPM: 10.5
Samples: 4

Max nTPM: 17.0
Min nTPM: 5.8
Sample A Female 6.4
Sample B Female 12.9
Sample C Male 17.0
Sample D Male 5.8
Ventral hippocampus
nTPM: 10.4
Samples: 4

Max nTPM: 13.9
Min nTPM: 8.0
Sample A Female 8.0
Sample B Female 9.8
Sample C Male 13.9
Sample D Male 9.8

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 17.9
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 17.9
Samples: 4

Max nTPM: 19.0
Min nTPM: 16.8
Sample A Male 17.0
Sample B Male 16.8
Sample C Female 19.0
Sample D Female 18.9
Hippocampal formation
nTPM: 14.3
Samples: 4

Max nTPM: 19.3
Min nTPM: 11.7
Sample A Male 13.0
Sample B Male 13.1
Sample C Female 11.7
Sample D Female 19.3

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.0
68191294 Antisense, RP_041123_02_C08, Mouse strain C57BL/6J (56 days, male) 0.0

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