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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
475.9
nTPM
Monaco:
1351.6
nTPM
Schmiedel:
3338.0
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
475.9
HPA sample
nTPM
gdT-cell nTPM: 475.9
Samples: 6
Max nTPM: 547.7
Min nTPM: 375.5
P10809_1007
547.7
P10809_1022
514.8
P10809_1041
475.9
P10809_1060
375.5
P10809_1077
527.7
P10809_1098
414.0
MAIT T-cell nTPM: 313.9
Samples: 6
Max nTPM: 367.4
Min nTPM: 278.3
P10809_1006
328.5
P10809_1024
367.4
P10809_1043
278.3
P10809_1062
280.2
P10809_1083
282.9
P10809_1097
346.2
Memory CD4 T-cell nTPM: 229.3
Samples: 6
Max nTPM: 282.8
Min nTPM: 161.0
P10809_1014
260.7
P10809_1026
194.5
P10809_1045
199.5
P10809_1064
282.8
P10809_1086
277.0
P10809_1113
161.0
Memory CD8 T-cell nTPM: 362.8
Samples: 5
Max nTPM: 461.7
Min nTPM: 270.8
P10809_1012
332.2
P10809_1027
461.7
P10809_1046
311.7
P10809_1065
437.7
P10809_1111
270.8
Naive CD4 T-cell nTPM: 125.8
Samples: 6
Max nTPM: 177.0
Min nTPM: 73.5
P10809_1015
177.0
P10809_1030
136.1
P10809_1049
99.9
P10809_1068
101.3
P10809_1085
167.1
P10809_1112
73.5
Naive CD8 T-cell nTPM: 269.2
Samples: 6
Max nTPM: 477.5
Min nTPM: 138.7
P10809_1016
181.2
P10809_1031
200.3
P10809_1050
266.1
P10809_1069
351.2
P10809_1087
477.5
P10809_1110
138.7
T-reg nTPM: 393.7
Samples: 6
Max nTPM: 504.7
Min nTPM: 277.2
P10809_1018
504.7
P10809_1037
468.2
P10809_1056
277.2
P10809_1075
385.6
P10809_1094
368.8
P10809_1106
357.4
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
1351.6
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 544.7
Samples: 4
Max nTPM: 827.5
Min nTPM: 305.7
RHH5202_R3573
827.5
RHH5230_R3602
381.0
RHH5259_R3631
305.7
RHH5288_R3660
664.6
Effector memory CD8 T-cell nTPM: 980.6
Samples: 4
Max nTPM: 1310.4
Min nTPM: 586.8
RHH5203_R3574
1310.4
RHH5231_R3603
1104.5
RHH5260_R3632
586.8
RHH5289_R3661
920.7
MAIT T-cell nTPM: 837.5
Samples: 4
Max nTPM: 1097.4
Min nTPM: 677.0
RHH5233_R3605
1097.4
RHH5205_R3576
731.0
RHH5262_R3634
677.0
RHH5297_R3663
844.7
Memory CD4 T-cell TFH nTPM: 561.1
Samples: 4
Max nTPM: 850.3
Min nTPM: 378.0
RHH5300_R3666
489.3
RHH5236_R3608
526.8
RHH5265_R3637
378.0
RHH5208_R3579
850.3
Memory CD4 T-cell Th1 nTPM: 407.3
Samples: 4
Max nTPM: 594.3
Min nTPM: 258.6
RHH5210_R3581
464.2
RHH5302_R3668
594.3
RHH5238_R3610
312.2
RHH5267_R3639
258.6
Memory CD4 T-cell Th1/Th17 nTPM: 544.1
Samples: 4
Max nTPM: 937.8
Min nTPM: 234.0
RHH5303_R3669
707.4
RHH5211_R3582
937.8
RHH5239_R3611
234.0
RHH5268_R3640
297.1
Memory CD4 T-cell Th17 nTPM: 409.6
Samples: 4
Max nTPM: 680.8
Min nTPM: 197.1
RHH5304_R3670
442.5
RHH5212_R3583
680.8
RHH5240_R3612
317.8
RHH5269_R3641
197.1
Memory CD4 T-cell Th2 nTPM: 524.9
Samples: 4
Max nTPM: 683.6
Min nTPM: 302.7
RHH5305_R3671
571.0
RHH5213_R3584
683.6
RHH5241_R3613
542.2
RHH5270_R3642
302.7
Naive CD4 T-cell nTPM: 226.4
Samples: 4
Max nTPM: 378.2
Min nTPM: 132.8
RHH5306_R3672
216.5
RHH5214_R3585
378.2
RHH5242_R3614
178.1
RHH5271_R3643
132.8
Naive CD8 T-cell nTPM: 211.9
Samples: 4
Max nTPM: 388.6
Min nTPM: 98.0
RHH5201_R3572
388.6
RHH5229_R3601
98.0
RHH5258_R3630
188.0
RHH5287_R3659
173.1
Non-Vd2 gdTCR nTPM: 1351.6
Samples: 4
Max nTPM: 1690.8
Min nTPM: 659.1
RHH5235_R3607
659.1
RHH5264_R3636
1672.0
RHH5207_R3578
1690.8
RHH5299_R3665
1384.5
T-reg nTPM: 459.6
Samples: 4
Max nTPM: 569.5
Min nTPM: 262.5
RHH5301_R3667
569.5
RHH5237_R3609
534.1
RHH5266_R3638
262.5
RHH5209_R3580
472.4
Terminal effector memory CD4 T-cell nTPM: 637.2
Samples: 2
Max nTPM: 883.6
Min nTPM: 390.8
RHH5243_R3615
390.8
RHH5272_R3644
883.6
Terminal effector memory CD8 T-cell nTPM: 1283.7
Samples: 4
Max nTPM: 1937.6
Min nTPM: 721.6
RHH5232_R3604
1109.2
RHH5204_R3575
1937.6
RHH5261_R3633
721.6
RHH5296_R3662
1366.3
Vd2 gdTCR nTPM: 1234.2
Samples: 4
Max nTPM: 2243.2
Min nTPM: 687.6
RHH5234_R3606
935.9
RHH5206_R3577
2243.2
RHH5263_R3635
687.6
RHH5298_R3664
1070.1
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.