We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
42.1
nTPM
Monaco:
87.0
nTPM
Schmiedel:
58.2
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
42.1
HPA sample
nTPM
gdT-cell nTPM: 40.9
Samples: 6
Max nTPM: 46.7
Min nTPM: 29.7
P10809_1007
29.7
P10809_1022
40.5
P10809_1041
37.0
P10809_1060
44.9
P10809_1077
46.7
P10809_1098
46.3
MAIT T-cell nTPM: 37.4
Samples: 6
Max nTPM: 50.5
Min nTPM: 21.3
P10809_1006
30.3
P10809_1024
50.5
P10809_1043
21.3
P10809_1062
40.5
P10809_1083
44.9
P10809_1097
37.0
Memory CD4 T-cell nTPM: 30.8
Samples: 6
Max nTPM: 42.0
Min nTPM: 21.2
P10809_1014
21.9
P10809_1026
21.2
P10809_1045
25.4
P10809_1064
41.7
P10809_1086
42.0
P10809_1113
32.7
Memory CD8 T-cell nTPM: 42.1
Samples: 5
Max nTPM: 59.1
Min nTPM: 21.9
P10809_1012
21.9
P10809_1027
54.5
P10809_1046
32.6
P10809_1065
59.1
P10809_1111
42.5
Naive CD4 T-cell nTPM: 26.8
Samples: 6
Max nTPM: 35.1
Min nTPM: 20.4
P10809_1015
25.5
P10809_1030
20.4
P10809_1049
22.0
P10809_1068
31.3
P10809_1085
35.1
P10809_1112
26.2
Naive CD8 T-cell nTPM: 37.8
Samples: 6
Max nTPM: 61.7
Min nTPM: 20.4
P10809_1016
20.4
P10809_1031
36.4
P10809_1050
28.7
P10809_1069
55.6
P10809_1087
61.7
P10809_1110
23.9
T-reg nTPM: 38.4
Samples: 6
Max nTPM: 57.2
Min nTPM: 23.1
P10809_1018
31.7
P10809_1037
42.1
P10809_1056
23.1
P10809_1075
38.7
P10809_1094
37.4
P10809_1106
57.2
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
87.0
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 42.1
Samples: 4
Max nTPM: 62.5
Min nTPM: 27.6
RHH5202_R3573
38.1
RHH5230_R3602
27.6
RHH5259_R3631
62.5
RHH5288_R3660
40.2
Effector memory CD8 T-cell nTPM: 69.2
Samples: 4
Max nTPM: 84.7
Min nTPM: 45.4
RHH5203_R3574
70.1
RHH5231_R3603
45.4
RHH5260_R3632
76.5
RHH5289_R3661
84.7
MAIT T-cell nTPM: 56.7
Samples: 4
Max nTPM: 59.3
Min nTPM: 54.7
RHH5233_R3605
57.7
RHH5205_R3576
55.1
RHH5262_R3634
59.3
RHH5297_R3663
54.7
Memory CD4 T-cell TFH nTPM: 45.9
Samples: 4
Max nTPM: 55.1
Min nTPM: 37.2
RHH5300_R3666
37.2
RHH5236_R3608
55.1
RHH5265_R3637
48.9
RHH5208_R3579
42.2
Memory CD4 T-cell Th1 nTPM: 50.2
Samples: 4
Max nTPM: 55.8
Min nTPM: 41.2
RHH5210_R3581
48.8
RHH5302_R3668
41.2
RHH5238_R3610
54.8
RHH5267_R3639
55.8
Memory CD4 T-cell Th1/Th17 nTPM: 53.5
Samples: 4
Max nTPM: 62.0
Min nTPM: 44.9
RHH5303_R3669
49.3
RHH5211_R3582
44.9
RHH5239_R3611
62.0
RHH5268_R3640
57.8
Memory CD4 T-cell Th17 nTPM: 56.5
Samples: 4
Max nTPM: 71.4
Min nTPM: 45.6
RHH5304_R3670
58.3
RHH5212_R3583
50.5
RHH5240_R3612
71.4
RHH5269_R3641
45.6
Memory CD4 T-cell Th2 nTPM: 47.3
Samples: 4
Max nTPM: 48.0
Min nTPM: 46.2
RHH5305_R3671
47.6
RHH5213_R3584
47.3
RHH5241_R3613
46.2
RHH5270_R3642
48.0
Naive CD4 T-cell nTPM: 51.9
Samples: 4
Max nTPM: 65.5
Min nTPM: 41.5
RHH5306_R3672
48.6
RHH5214_R3585
41.5
RHH5242_R3614
52.0
RHH5271_R3643
65.5
Naive CD8 T-cell nTPM: 41.6
Samples: 4
Max nTPM: 49.1
Min nTPM: 29.9
RHH5201_R3572
47.8
RHH5229_R3601
39.7
RHH5258_R3630
29.9
RHH5287_R3659
49.1
Non-Vd2 gdTCR nTPM: 87.0
Samples: 4
Max nTPM: 109.2
Min nTPM: 74.0
RHH5235_R3607
74.0
RHH5264_R3636
82.8
RHH5207_R3578
109.2
RHH5299_R3665
82.1
T-reg nTPM: 55.0
Samples: 4
Max nTPM: 67.2
Min nTPM: 48.3
RHH5301_R3667
48.3
RHH5237_R3609
51.3
RHH5266_R3638
53.0
RHH5209_R3580
67.2
Terminal effector memory CD4 T-cell nTPM: 81.1
Samples: 2
Max nTPM: 92.8
Min nTPM: 69.3
RHH5243_R3615
92.8
RHH5272_R3644
69.3
Terminal effector memory CD8 T-cell nTPM: 72.2
Samples: 4
Max nTPM: 80.2
Min nTPM: 63.5
RHH5232_R3604
73.9
RHH5204_R3575
63.5
RHH5261_R3633
71.0
RHH5296_R3662
80.2
Vd2 gdTCR nTPM: 49.5
Samples: 4
Max nTPM: 60.8
Min nTPM: 36.6
RHH5234_R3606
36.6
RHH5206_R3577
60.8
RHH5263_R3635
51.5
RHH5298_R3664
49.0
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
