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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
31.1
nTPM
Monaco:
53.6
nTPM
Schmiedel:
28.4
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
31.1
HPA sample
nTPM
gdT-cell nTPM: 14.0
Samples: 6
Max nTPM: 20.8
Min nTPM: 3.0
P10809_1007
14.2
P10809_1022
20.8
P10809_1041
18.5
P10809_1060
7.9
P10809_1077
3.0
P10809_1098
19.6
MAIT T-cell nTPM: 7.7
Samples: 6
Max nTPM: 16.4
Min nTPM: 2.6
P10809_1006
6.3
P10809_1024
16.4
P10809_1043
7.9
P10809_1062
4.4
P10809_1083
2.6
P10809_1097
8.6
Memory CD4 T-cell nTPM: 13.2
Samples: 6
Max nTPM: 17.4
Min nTPM: 3.7
P10809_1014
14.9
P10809_1026
17.3
P10809_1045
17.4
P10809_1064
10.0
P10809_1086
3.7
P10809_1113
16.1
Memory CD8 T-cell nTPM: 22.7
Samples: 5
Max nTPM: 33.7
Min nTPM: 13.1
P10809_1012
16.6
P10809_1027
30.4
P10809_1046
19.6
P10809_1065
13.1
P10809_1111
33.7
Naive CD4 T-cell nTPM: 25.3
Samples: 6
Max nTPM: 33.0
Min nTPM: 19.4
P10809_1015
20.0
P10809_1030
22.9
P10809_1049
33.0
P10809_1068
23.4
P10809_1085
19.4
P10809_1112
32.8
Naive CD8 T-cell nTPM: 17.2
Samples: 6
Max nTPM: 24.9
Min nTPM: 10.1
P10809_1016
12.8
P10809_1031
15.8
P10809_1050
24.9
P10809_1069
14.8
P10809_1087
10.1
P10809_1110
24.9
T-reg nTPM: 31.2
Samples: 6
Max nTPM: 71.8
Min nTPM: 7.7
P10809_1018
15.6
P10809_1037
25.4
P10809_1056
71.8
P10809_1075
21.5
P10809_1094
7.7
P10809_1106
44.9
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
53.6
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 21.8
Samples: 4
Max nTPM: 33.1
Min nTPM: 10.4
RHH5202_R3573
33.1
RHH5230_R3602
14.3
RHH5259_R3631
10.4
RHH5288_R3660
29.2
Effector memory CD8 T-cell nTPM: 27.1
Samples: 4
Max nTPM: 31.5
Min nTPM: 22.2
RHH5203_R3574
31.5
RHH5231_R3603
30.5
RHH5260_R3632
22.2
RHH5289_R3661
24.0
MAIT T-cell nTPM: 4.9
Samples: 4
Max nTPM: 8.6
Min nTPM: 2.5
RHH5233_R3605
2.9
RHH5205_R3576
5.7
RHH5262_R3634
2.5
RHH5297_R3663
8.6
Memory CD4 T-cell TFH nTPM: 14.4
Samples: 4
Max nTPM: 17.9
Min nTPM: 11.1
RHH5300_R3666
11.1
RHH5236_R3608
17.9
RHH5265_R3637
16.3
RHH5208_R3579
12.1
Memory CD4 T-cell Th1 nTPM: 22.2
Samples: 4
Max nTPM: 29.1
Min nTPM: 14.0
RHH5210_R3581
29.1
RHH5302_R3668
23.8
RHH5238_R3610
14.0
RHH5267_R3639
22.0
Memory CD4 T-cell Th1/Th17 nTPM: 11.0
Samples: 4
Max nTPM: 15.9
Min nTPM: 7.1
RHH5303_R3669
12.6
RHH5211_R3582
15.9
RHH5239_R3611
7.1
RHH5268_R3640
8.3
Memory CD4 T-cell Th17 nTPM: 11.4
Samples: 4
Max nTPM: 15.7
Min nTPM: 8.4
RHH5304_R3670
12.2
RHH5212_R3583
15.7
RHH5240_R3612
8.4
RHH5269_R3641
9.1
Memory CD4 T-cell Th2 nTPM: 35.0
Samples: 4
Max nTPM: 36.4
Min nTPM: 34.0
RHH5305_R3671
34.5
RHH5213_R3584
34.0
RHH5241_R3613
36.4
RHH5270_R3642
35.2
Naive CD4 T-cell nTPM: 32.2
Samples: 4
Max nTPM: 40.2
Min nTPM: 24.0
RHH5306_R3672
33.2
RHH5214_R3585
40.2
RHH5242_R3614
24.0
RHH5271_R3643
31.4
Naive CD8 T-cell nTPM: 26.3
Samples: 4
Max nTPM: 30.8
Min nTPM: 15.1
RHH5201_R3572
30.8
RHH5229_R3601
15.1
RHH5258_R3630
29.4
RHH5287_R3659
29.7
Non-Vd2 gdTCR nTPM: 14.9
Samples: 4
Max nTPM: 18.4
Min nTPM: 10.9
RHH5235_R3607
17.3
RHH5264_R3636
12.8
RHH5207_R3578
10.9
RHH5299_R3665
18.4
T-reg nTPM: 53.6
Samples: 4
Max nTPM: 57.8
Min nTPM: 48.5
RHH5301_R3667
48.5
RHH5237_R3609
52.5
RHH5266_R3638
57.8
RHH5209_R3580
55.4
Terminal effector memory CD4 T-cell nTPM: 20.0
Samples: 2
Max nTPM: 27.7
Min nTPM: 12.2
RHH5243_R3615
12.2
RHH5272_R3644
27.7
Terminal effector memory CD8 T-cell nTPM: 17.8
Samples: 4
Max nTPM: 26.6
Min nTPM: 12.0
RHH5232_R3604
16.6
RHH5204_R3575
12.0
RHH5261_R3633
15.9
RHH5296_R3662
26.6
Vd2 gdTCR nTPM: 18.2
Samples: 4
Max nTPM: 26.2
Min nTPM: 15.3
RHH5234_R3606
15.8
RHH5206_R3577
15.6
RHH5263_R3635
15.3
RHH5298_R3664
26.2
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
