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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
153.4
nTPM
Monaco:
119.1
nTPM
Schmiedel:
301.7
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
153.4
HPA sample
nTPM
gdT-cell nTPM: 120.4
Samples: 6
Max nTPM: 176.5
Min nTPM: 75.9
P10809_1007
75.9
P10809_1022
137.8
P10809_1041
176.5
P10809_1060
111.2
P10809_1077
116.4
P10809_1098
104.5
MAIT T-cell nTPM: 106.4
Samples: 6
Max nTPM: 152.9
Min nTPM: 61.5
P10809_1006
61.5
P10809_1024
152.9
P10809_1043
129.4
P10809_1062
86.6
P10809_1083
84.9
P10809_1097
122.9
Memory CD4 T-cell nTPM: 96.2
Samples: 6
Max nTPM: 115.8
Min nTPM: 64.7
P10809_1014
64.7
P10809_1026
108.4
P10809_1045
115.8
P10809_1064
95.0
P10809_1086
90.8
P10809_1113
102.6
Memory CD8 T-cell nTPM: 96.3
Samples: 5
Max nTPM: 117.4
Min nTPM: 69.8
P10809_1012
69.8
P10809_1027
87.5
P10809_1046
117.4
P10809_1065
97.6
P10809_1111
109.0
Naive CD4 T-cell nTPM: 83.4
Samples: 6
Max nTPM: 112.2
Min nTPM: 54.8
P10809_1015
54.8
P10809_1030
81.1
P10809_1049
112.2
P10809_1068
76.5
P10809_1085
87.3
P10809_1112
88.3
Naive CD8 T-cell nTPM: 90.4
Samples: 6
Max nTPM: 106.0
Min nTPM: 65.2
P10809_1016
65.2
P10809_1031
106.0
P10809_1050
97.2
P10809_1069
100.1
P10809_1087
89.7
P10809_1110
83.9
T-reg nTPM: 153.4
Samples: 6
Max nTPM: 211.6
Min nTPM: 119.6
P10809_1018
119.6
P10809_1037
147.3
P10809_1056
211.6
P10809_1075
131.9
P10809_1094
138.6
P10809_1106
171.2
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
119.1
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 95.4
Samples: 4
Max nTPM: 119.4
Min nTPM: 54.0
RHH5202_R3573
119.4
RHH5230_R3602
99.4
RHH5259_R3631
54.0
RHH5288_R3660
108.8
Effector memory CD8 T-cell nTPM: 119.1
Samples: 4
Max nTPM: 156.2
Min nTPM: 92.8
RHH5203_R3574
156.2
RHH5231_R3603
92.8
RHH5260_R3632
104.7
RHH5289_R3661
122.5
MAIT T-cell nTPM: 103.7
Samples: 4
Max nTPM: 132.9
Min nTPM: 88.1
RHH5233_R3605
99.3
RHH5205_R3576
88.1
RHH5262_R3634
132.9
RHH5297_R3663
94.4
Memory CD4 T-cell TFH nTPM: 93.7
Samples: 4
Max nTPM: 110.9
Min nTPM: 64.0
RHH5300_R3666
64.0
RHH5236_R3608
110.9
RHH5265_R3637
92.6
RHH5208_R3579
107.4
Memory CD4 T-cell Th1 nTPM: 84.9
Samples: 4
Max nTPM: 98.1
Min nTPM: 72.3
RHH5210_R3581
98.1
RHH5302_R3668
93.6
RHH5238_R3610
75.6
RHH5267_R3639
72.3
Memory CD4 T-cell Th1/Th17 nTPM: 86.1
Samples: 4
Max nTPM: 139.0
Min nTPM: 46.2
RHH5303_R3669
95.5
RHH5211_R3582
139.0
RHH5239_R3611
46.2
RHH5268_R3640
63.6
Memory CD4 T-cell Th17 nTPM: 93.3
Samples: 4
Max nTPM: 135.8
Min nTPM: 71.6
RHH5304_R3670
71.6
RHH5212_R3583
135.8
RHH5240_R3612
74.6
RHH5269_R3641
91.1
Memory CD4 T-cell Th2 nTPM: 95.7
Samples: 4
Max nTPM: 114.3
Min nTPM: 75.8
RHH5305_R3671
92.9
RHH5213_R3584
114.3
RHH5241_R3613
99.7
RHH5270_R3642
75.8
Naive CD4 T-cell nTPM: 97.8
Samples: 4
Max nTPM: 110.0
Min nTPM: 81.4
RHH5306_R3672
104.3
RHH5214_R3585
95.3
RHH5242_R3614
81.4
RHH5271_R3643
110.0
Naive CD8 T-cell nTPM: 94.7
Samples: 4
Max nTPM: 115.3
Min nTPM: 51.6
RHH5201_R3572
99.2
RHH5229_R3601
51.6
RHH5258_R3630
115.3
RHH5287_R3659
112.5
Non-Vd2 gdTCR nTPM: 101.7
Samples: 4
Max nTPM: 115.4
Min nTPM: 86.6
RHH5235_R3607
86.6
RHH5264_R3636
107.6
RHH5207_R3578
97.1
RHH5299_R3665
115.4
T-reg nTPM: 111.6
Samples: 4
Max nTPM: 150.1
Min nTPM: 92.4
RHH5301_R3667
92.4
RHH5237_R3609
150.1
RHH5266_R3638
100.7
RHH5209_R3580
103.0
Terminal effector memory CD4 T-cell nTPM: 95.4
Samples: 2
Max nTPM: 120.6
Min nTPM: 70.2
RHH5243_R3615
70.2
RHH5272_R3644
120.6
Terminal effector memory CD8 T-cell nTPM: 108.3
Samples: 4
Max nTPM: 125.4
Min nTPM: 95.0
RHH5232_R3604
100.7
RHH5204_R3575
112.0
RHH5261_R3633
95.0
RHH5296_R3662
125.4
Vd2 gdTCR nTPM: 100.3
Samples: 4
Max nTPM: 130.9
Min nTPM: 80.9
RHH5234_R3606
80.9
RHH5206_R3577
130.9
RHH5263_R3635
92.7
RHH5298_R3664
96.5
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
