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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
187.9
nTPM
Monaco:
562.3
nTPM
Schmiedel:
1066.8
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
187.9
HPA sample
nTPM
gdT-cell nTPM: 187.9
Samples: 6
Max nTPM: 250.3
Min nTPM: 130.2
P10809_1007
250.3
P10809_1022
221.5
P10809_1041
210.3
P10809_1060
130.2
P10809_1077
144.1
P10809_1098
170.8
MAIT T-cell nTPM: 124.1
Samples: 6
Max nTPM: 185.1
Min nTPM: 89.7
P10809_1006
185.1
P10809_1024
112.8
P10809_1043
133.8
P10809_1062
111.5
P10809_1083
89.7
P10809_1097
111.6
Memory CD4 T-cell nTPM: 94.5
Samples: 6
Max nTPM: 132.2
Min nTPM: 79.7
P10809_1014
132.2
P10809_1026
89.0
P10809_1045
89.0
P10809_1064
91.4
P10809_1086
79.7
P10809_1113
85.6
Memory CD8 T-cell nTPM: 129.6
Samples: 5
Max nTPM: 179.9
Min nTPM: 96.1
P10809_1012
179.9
P10809_1027
112.9
P10809_1046
152.0
P10809_1065
107.2
P10809_1111
96.1
Naive CD4 T-cell nTPM: 65.7
Samples: 6
Max nTPM: 81.8
Min nTPM: 34.3
P10809_1015
81.8
P10809_1030
57.9
P10809_1049
34.3
P10809_1068
64.1
P10809_1085
77.9
P10809_1112
78.0
Naive CD8 T-cell nTPM: 92.2
Samples: 6
Max nTPM: 108.5
Min nTPM: 76.3
P10809_1016
108.5
P10809_1031
86.6
P10809_1050
99.5
P10809_1069
76.3
P10809_1087
103.7
P10809_1110
78.6
T-reg nTPM: 70.9
Samples: 6
Max nTPM: 111.1
Min nTPM: 51.4
P10809_1018
111.1
P10809_1037
74.7
P10809_1056
51.4
P10809_1075
52.2
P10809_1094
80.6
P10809_1106
55.1
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
562.3
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 336.2
Samples: 4
Max nTPM: 391.2
Min nTPM: 258.9
RHH5202_R3573
323.6
RHH5230_R3602
391.2
RHH5259_R3631
370.9
RHH5288_R3660
258.9
Effector memory CD8 T-cell nTPM: 464.7
Samples: 4
Max nTPM: 513.9
Min nTPM: 421.9
RHH5203_R3574
438.3
RHH5231_R3603
421.9
RHH5260_R3632
513.9
RHH5289_R3661
484.6
MAIT T-cell nTPM: 388.3
Samples: 4
Max nTPM: 460.3
Min nTPM: 317.3
RHH5233_R3605
391.5
RHH5205_R3576
460.3
RHH5262_R3634
384.0
RHH5297_R3663
317.3
Memory CD4 T-cell TFH nTPM: 259.2
Samples: 4
Max nTPM: 307.2
Min nTPM: 212.3
RHH5300_R3666
244.5
RHH5236_R3608
212.3
RHH5265_R3637
272.9
RHH5208_R3579
307.2
Memory CD4 T-cell Th1 nTPM: 328.5
Samples: 4
Max nTPM: 376.1
Min nTPM: 276.4
RHH5210_R3581
306.3
RHH5302_R3668
276.4
RHH5238_R3610
376.1
RHH5267_R3639
355.0
Memory CD4 T-cell Th1/Th17 nTPM: 378.1
Samples: 4
Max nTPM: 431.1
Min nTPM: 296.8
RHH5303_R3669
296.8
RHH5211_R3582
431.1
RHH5239_R3611
388.1
RHH5268_R3640
396.5
Memory CD4 T-cell Th17 nTPM: 347.3
Samples: 4
Max nTPM: 373.3
Min nTPM: 323.4
RHH5304_R3670
323.4
RHH5212_R3583
356.9
RHH5240_R3612
373.3
RHH5269_R3641
335.7
Memory CD4 T-cell Th2 nTPM: 310.3
Samples: 4
Max nTPM: 340.6
Min nTPM: 289.7
RHH5305_R3671
289.7
RHH5213_R3584
290.9
RHH5241_R3613
320.0
RHH5270_R3642
340.6
Naive CD4 T-cell nTPM: 226.5
Samples: 4
Max nTPM: 267.0
Min nTPM: 168.7
RHH5306_R3672
168.7
RHH5214_R3585
210.1
RHH5242_R3614
267.0
RHH5271_R3643
260.3
Naive CD8 T-cell nTPM: 233.9
Samples: 4
Max nTPM: 289.1
Min nTPM: 165.3
RHH5201_R3572
222.2
RHH5229_R3601
259.0
RHH5258_R3630
289.1
RHH5287_R3659
165.3
Non-Vd2 gdTCR nTPM: 562.3
Samples: 4
Max nTPM: 656.5
Min nTPM: 484.2
RHH5235_R3607
484.2
RHH5264_R3636
544.3
RHH5207_R3578
656.5
RHH5299_R3665
564.3
T-reg nTPM: 191.1
Samples: 4
Max nTPM: 225.4
Min nTPM: 163.6
RHH5301_R3667
163.6
RHH5237_R3609
176.6
RHH5266_R3638
225.4
RHH5209_R3580
198.6
Terminal effector memory CD4 T-cell nTPM: 478.0
Samples: 2
Max nTPM: 486.4
Min nTPM: 469.6
RHH5243_R3615
486.4
RHH5272_R3644
469.6
Terminal effector memory CD8 T-cell nTPM: 562.2
Samples: 4
Max nTPM: 596.8
Min nTPM: 521.6
RHH5232_R3604
537.0
RHH5204_R3575
521.6
RHH5261_R3633
596.8
RHH5296_R3662
593.5
Vd2 gdTCR nTPM: 430.9
Samples: 4
Max nTPM: 527.7
Min nTPM: 321.1
RHH5234_R3606
396.9
RHH5206_R3577
527.7
RHH5263_R3635
477.9
RHH5298_R3664
321.1
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
