HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: Medium
RNA expressioni
Consensus:16.4 nTPM
HPA Brain:48.0 nTPM
GTEx:16.4 nTPM
FANTOM5:100.2 Scaled Tags Per Million
Pig:31.9 nTPM
Mouse:15.7 nTPM

HIPPOCAMPUS - Antibody stainingi
Antibody HPA039340Antibody HPA040140Antibody HPA047806
Glial cells Not detectedMediumNot detected
Neuronal cells Not detectedMediumMedium






HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 48.0
Sample id Sample description nTPM
Hippocampus
nTPM: 47.3
2529 Female, age 94, left hemisphere 56.3
2621 Female, age 67, right hemisphere 49.4
1855 Male, age 76, left hemisphere 45.6
1911 Female, age 85, right hemisphere 45.4
1898 Male, age 80, left hemisphere 45.1
2148 Female, age 91, left hemisphere 42.2
Dentate gyrus
nTPM: 43.1
2530 Female, age 94, left hemisphere 58.8
2531 Female, age 67, both hemispheres 49.4
2246 Female, age 85, both hemispheres 42.4
2010 Male, age 76, both hemispheres 41.7
1927 Female, age 91, both hemispheres 34.1
2528 Male, age 74, both hemispheres 32.2
Entorhinal gyrus
nTPM: 47.6
2686 Male, age 75, right hemisphere 64.0
2117 Female, age 91, right hemisphere 52.9
2613 Female, age 94, left hemisphere 45.7
1938 Female, age 85, left hemisphere 43.3
1787 Male, age 76, left hemisphere 40.4
2764 Male, age 80, right hemisphere 39.6
Hippocampus, CA1
nTPM: 40.9
2527 Male, age 74, both hemispheres 47.1
2749 Male, age 80, left hemisphere 43.4
1873 Female, age 85, both hemispheres 43.3
2045 Male, age 76, both hemispheres 36.4
2082 Female, age 91, right hemisphere 34.5
Hippocampus, CA2
nTPM: 41.1
2437 Female, age 94, left hemisphere 46.4
1963 Male, age 80, left hemisphere 42.4
1892 Male, age 76, both hemispheres 41.9
2113 Female, age 91, right hemisphere 40.3
1940 Female, age 85, left hemisphere 38.8
2249 Male, age 74, both hemispheres 37.2
Hippocampus, CA3
nTPM: 39.5
1891 Female, age 85, both hemispheres 46.5
2861 Female, age 67, both hemispheres 43.1
2137 Male, age 80, left hemisphere 42.0
1867 Male, age 76, both hemispheres 39.8
2620 Female, age 94, left hemisphere 36.9
2436 Male, age 74, both hemispheres 28.7
Parahippocampal cortex
nTPM: 44.7
2245 Female, age 91, both hemispheres 52.8
2532 Female, age 72, left hemisphere 52.7
2622 Female, age 67, right hemisphere 52.2
2692 Male, age 74, both hemispheres 51.6
1850 Male, age 80, both hemispheres 45.9
1990 Female, age 91, right hemisphere 39.8
2018 Male, age 76, both hemispheres 39.3
2693 Female, age 94, both hemispheres 39.3
1933 Female, age 85, both hemispheres 37.7
2250 Female, age 67, right hemisphere 36.1
Perirhinal gyrus
nTPM: 38.7
2848 Male, age 76, right hemisphere 43.9
1841 Female, age 85, right hemisphere 39.0
1794 Male, age 80, right hemisphere 37.9
2521 Female, age 94, right hemisphere 36.5
1847 Female, age 91, left hemisphere 36.3
Subiculum
nTPM: 48.0
2438 Female, age 94, left hemisphere 65.1
1901 Male, age 80, both hemispheres 51.5
1977 Female, age 85, both hemispheres 46.3
2042 Male, age 76, both hemispheres 45.2
2619 Male, age 74, both hemispheres 43.1
2729 Female, age 91, right hemisphere 36.5

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 16.4
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 16.4
Samples: 197

Max nTPM: 32.0
Min nTPM: 9.8
Std nTPM: 4.1
Median nTPM: 15.4
GTEX-13FHP-0011-R1b-SM-5K7XL 50-59 years, male 32.0
GTEX-11UD1-0011-R1b-SM-5BC7D 40-49 years, female 31.2
GTEX-QMR6-0011-R1A-SM-32PKW 50-59 years, male 29.6
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 28.7
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 28.3
GTEX-1A32A-0011-R1a-SM-7P8SQ 50-59 years, female 27.7
GTEX-PWO3-0011-R1A-SM-2I5EW 60-69 years, female 26.8
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 26.2
GTEX-14PJO-0011-R1b-SM-6AJAK 60-69 years, male 25.6
GTEX-17MF6-0011-R1a-SM-72D6O 40-49 years, male 25.6
GTEX-16GPK-0011-R1b-SM-7EWDH 60-69 years, male 24.7
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 100.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 100.2
FF:10169-103B7 60 years, female 103.8
FF:10153-102I9 76 years, female 96.6

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 31.9
Pig sample Sample description nTPM
Subiculum
nTPM: 31.1
Samples: 4

Max nTPM: 34.9
Min nTPM: 29.0
Sample A Female 34.9
Sample B Female 30.1
Sample C Male 30.5
Sample D Male 29.0
Dorsal hippocampus
nTPM: 31.9
Samples: 4

Max nTPM: 34.6
Min nTPM: 29.8
Sample A Female 32.3
Sample B Female 29.8
Sample C Male 34.6
Sample D Male 30.7
Entorhinal cortex
nTPM: 31.6
Samples: 4

Max nTPM: 33.8
Min nTPM: 29.5
Sample A Female 32.7
Sample B Female 29.5
Sample C Male 30.4
Sample D Male 33.8
Ventral hippocampus
nTPM: 30.6
Samples: 4

Max nTPM: 34.8
Min nTPM: 28.2
Sample A Female 29.2
Sample B Female 28.2
Sample C Male 30.1
Sample D Male 34.8

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 15.7
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 15.7
Samples: 4

Max nTPM: 22.2
Min nTPM: 13.1
Sample A Male 14.4
Sample B Male 13.1
Sample C Female 13.2
Sample D Female 22.2
Hippocampal formation
nTPM: 14.5
Samples: 4

Max nTPM: 18.1
Min nTPM: 10.6
Sample A Male 10.6
Sample B Male 17.7
Sample C Female 18.1
Sample D Female 11.7

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