We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
PFDN5
SECTIONS
  • TISSUE
  • BRAIN
  • SINGLE CELL TYPE
  • TISSUE CELL TYPE
  • PATHOLOGY
  • DISEASE
  • IMMUNE CELL
  • BLOOD PROTEIN
  • SUBCELLULAR
  • CELL LINE
  • STRUCTURE
  • INTERACTION
ABOUT
  • INTRODUCTION
  • HISTORY
  • ORGANIZATION
  • PUBLICATIONS
  • ANTIBODY SUBMISSION
  • ANTIBODY AVAILABILITY
  • ACKNOWLEDGMENTS
  • CONTACT
NEWS
  • NEWS ARTICLES
  • PRESS ROOM
LEARN
  • DICTIONARY
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
  • METHODS
  • EDUCATIONAL VIDEOS
DATA
  • DOWNLOADABLE DATA
  • PUBLICATION DATA
  • RELEASE HISTORY
  • SARS-COV-2
HELP
  • ANTIBODY VALIDATION
  • ASSAYS & ANNOTATION
  • DISCLAIMER
  • HELP & FAQ
  • PRIVACY STATEMENT
  • LICENCE & CITATION
Fields »
Search result

Field
Term
Gene name
Class
Subclass
Class
Keyword
Chromosome
External id
Tissue
Cell type
Expression
Patient ID
Tissue
Category
Cluster
Reliability
Brain region
Category
Brain region
Category
Brain region
Category
Cluster
Reliability
Cell type
Category
Cluster
Tissue
Cell type
Enrichment
Cancer
Prognosis
Cancer
Category
Cell type
Category
Cell lineage
Category
Cluster
Annotation
Disease
Location
Searches
Location
Cell line
Type
Phase
Reliability
Cancer type
Category
Cluster
Interacting gene
Number of interactions
Pathway
Category
Score
Score
Score
Validation
Validation
Validation
Validation
Antibodies
Protein structure
In atlas
Column


  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • TISSUE CELL

  • PATHOLOGY

  • DISEASE

  • IMMUNE

  • BLOOD

  • SUBCELL

  • CELL LINE

  • STRUCTURE

  • INTERACTION

  • PFDN5
IMMUNE CELL MONOCYTES Show tissue menu
B-CELLS DENDRITIC CELLS GRANULOCYTES MONOCYTES NK-CELLS PROGENITORS T-CELLS TOTAL PBMC
Immune cell proteome
Monocytes
MONOCYTES - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
HPA:2771.4 nTPM
Monaco:372.5 nTPM
Schmiedel:551.9 TPM

MONOCYTES - HPA RNA-seqi

The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.

Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM 2771.4
HPA sample nTPM
Classical monocyte
nTPM: 2771.4
Samples: 6

Max nTPM: 4069.8
Min nTPM: 2032.0
P10809_1003 4069.8
P10809_1020 2334.9
P10809_1039 3222.2
P10809_1058 2303.0
P10809_1080 2032.0
P10809_1107 2666.5
Intermediate monocyte
nTPM: 2100.9
Samples: 6

Max nTPM: 2888.4
Min nTPM: 1243.9
P10809_1004 1709.8
P10809_1023 2888.4
P10809_1042 2167.0
P10809_1061 1243.9
P10809_1081 1987.4
P10809_1108 2608.7
Non-classical monocyte
nTPM: 2233.4
Samples: 5

Max nTPM: 2724.2
Min nTPM: 1782.7
P10809_1005 1879.1
P10809_1053 2404.1
P10809_1072 1782.7
P10809_1082 2376.7
P10809_1109 2724.2

MONOCYTES - Monaco RNA-seqi

RNA-Seq data generated by Monaco et al is reported as average nTPM.

The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.

Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max nTPM 372.5
Monaco sample nTPM
Classical monocyte
nTPM: 264.5
Samples: 4

Max nTPM: 335.4
Min nTPM: 213.2
RHH5313_R3680 335.4
RHH5221_R3593 252.6
RHH5250_R3622 213.2
RHH5279_R3651 256.9
Intermediate monocyte
nTPM: 372.5
Samples: 4

Max nTPM: 482.5
Min nTPM: 256.6
RHH5314_R3681 409.9
RHH5222_R3594 482.5
RHH5251_R3623 341.0
RHH5280_R3652 256.6
Non-classical monocyte
nTPM: 317.2
Samples: 4

Max nTPM: 398.8
Min nTPM: 222.0
RHH5315_R3682 398.8
RHH5223_R3595 372.6
RHH5252_R3624 275.5
RHH5281_R3653 222.0

MONOCYTES - Schmiedel RNA-seqi

RNA-Seq data generated by Schmiedel et al is reported as average TPM.

The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.

Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.

Max TPM 551.9
Schmiedel sample id TPM
Classical monocyte
TPM: 536.1
Samples: 91

Max TPM: 665.6
Min TPM: 433.8
MONOCYTES_1 665.6
MONOCYTES_2 633.0
MONOCYTES_3 629.6
MONOCYTES_4 625.6
MONOCYTES_5 604.8
MONOCYTES_6 595.9
MONOCYTES_7 593.1
MONOCYTES_8 588.7
MONOCYTES_9 587.5
MONOCYTES_10 578.8
MONOCYTES_11 578.3
MONOCYTES_12 578.0
MONOCYTES_13 577.8
MONOCYTES_14 577.8
MONOCYTES_15 575.0
MONOCYTES_16 574.2
MONOCYTES_17 573.7
MONOCYTES_18 572.3
MONOCYTES_19 571.6
MONOCYTES_20 570.4
MONOCYTES_21 568.5
MONOCYTES_22 563.3
MONOCYTES_23 563.0
MONOCYTES_24 557.3
MONOCYTES_25 557.2
MONOCYTES_26 556.7
MONOCYTES_27 556.5
MONOCYTES_28 556.3
MONOCYTES_29 554.1
MONOCYTES_30 554.0
MONOCYTES_31 553.8
MONOCYTES_32 553.3
MONOCYTES_33 552.8
MONOCYTES_34 552.3
MONOCYTES_35 550.9
MONOCYTES_36 547.8
MONOCYTES_37 547.6
MONOCYTES_38 547.4
MONOCYTES_39 546.5
MONOCYTES_40 544.1
MONOCYTES_41 543.2
MONOCYTES_42 541.6
MONOCYTES_43 540.0
MONOCYTES_44 537.6
MONOCYTES_45 537.5
MONOCYTES_46 536.9
MONOCYTES_47 536.8
MONOCYTES_48 532.5
MONOCYTES_49 532.3
MONOCYTES_50 531.7
MONOCYTES_51 531.0
MONOCYTES_52 529.8
MONOCYTES_53 528.2
MONOCYTES_54 526.8
MONOCYTES_55 522.3
MONOCYTES_56 521.6
MONOCYTES_57 520.8
MONOCYTES_58 517.3
MONOCYTES_59 516.8
MONOCYTES_60 515.5
MONOCYTES_61 515.0
MONOCYTES_62 511.0
MONOCYTES_63 510.9
MONOCYTES_64 505.9
MONOCYTES_65 505.9
MONOCYTES_66 505.4
MONOCYTES_67 504.8
MONOCYTES_68 504.0
MONOCYTES_69 502.5
MONOCYTES_70 501.9
MONOCYTES_71 501.8
MONOCYTES_72 501.7
MONOCYTES_73 500.9
MONOCYTES_74 498.4
MONOCYTES_75 496.3
MONOCYTES_76 495.8
MONOCYTES_77 493.3
MONOCYTES_78 491.1
MONOCYTES_79 490.0
MONOCYTES_80 487.5
MONOCYTES_81 486.2
MONOCYTES_82 484.3
MONOCYTES_83 482.4
MONOCYTES_84 481.3
MONOCYTES_85 480.2
MONOCYTES_86 478.7
MONOCYTES_87 476.2
MONOCYTES_88 474.0
MONOCYTES_89 472.6
MONOCYTES_90 472.5
MONOCYTES_91 433.8
Show allShow less
Non-classical monocyte
TPM: 551.9
Samples: 90

Max TPM: 686.6
Min TPM: 447.9
M2_1 686.6
M2_2 677.7
M2_3 658.0
M2_4 655.4
M2_5 647.9
M2_6 638.4
M2_7 624.3
M2_8 607.5
M2_9 606.6
M2_10 605.5
M2_11 599.7
M2_12 596.9
M2_13 594.8
M2_14 590.4
M2_15 590.0
M2_16 588.3
M2_17 586.6
M2_18 585.4
M2_19 585.0
M2_20 584.9
M2_21 584.5
M2_22 582.7
M2_23 580.3
M2_24 579.2
M2_25 579.1
M2_26 577.8
M2_27 577.5
M2_28 577.2
M2_29 577.2
M2_30 574.2
M2_31 573.5
M2_32 573.3
M2_33 570.9
M2_34 569.3
M2_35 566.5
M2_36 566.2
M2_37 565.1
M2_38 564.6
M2_39 562.7
M2_40 561.9
M2_41 560.1
M2_42 557.6
M2_43 554.4
M2_44 551.9
M2_45 551.7
M2_46 550.3
M2_47 548.8
M2_48 547.7
M2_49 544.1
M2_50 543.2
M2_51 542.5
M2_52 541.5
M2_53 539.1
M2_54 538.5
M2_55 537.1
M2_56 535.0
M2_57 534.1
M2_58 533.7
M2_59 533.2
M2_60 532.5
M2_61 530.2
M2_62 528.7
M2_63 528.0
M2_64 525.0
M2_65 522.0
M2_66 522.0
M2_67 520.7
M2_68 519.8
M2_69 519.3
M2_70 518.6
M2_71 511.0
M2_72 510.9
M2_73 509.4
M2_74 506.8
M2_75 506.8
M2_76 506.4
M2_77 505.9
M2_78 504.6
M2_79 501.9
M2_80 497.8
M2_81 497.7
M2_82 492.3
M2_83 492.3
M2_84 488.3
M2_85 480.8
M2_86 464.5
M2_87 455.9
M2_88 454.8
M2_89 449.4
M2_90 447.9
Show allShow less

Contact

  • NEWS ARTICLES
  • PRESS ROOM

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS

The Human Protein Atlas

  • DOWNLOADABLE DATA
  • LICENCE & CITATION
  • HELP & FAQ
The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.


contact@proteinatlas.org