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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
108.1
nTPM
Monaco:
57.4
nTPM
Schmiedel:
29.7
TPM
T-CELLS - Annotated protein expression
Pending normal tissue analysis
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
108.1
HPA sample
nTPM
gdT-cell nTPM: 86.7
Samples: 6
Max nTPM: 127.2
Min nTPM: 62.9
P10809_1007
75.3
P10809_1022
78.6
P10809_1041
127.2
P10809_1060
62.9
P10809_1077
103.5
P10809_1098
72.9
MAIT T-cell nTPM: 77.0
Samples: 6
Max nTPM: 102.5
Min nTPM: 60.6
P10809_1006
60.6
P10809_1024
102.5
P10809_1043
83.3
P10809_1062
71.8
P10809_1083
74.3
P10809_1097
69.6
Memory CD4 T-cell nTPM: 82.4
Samples: 6
Max nTPM: 92.1
Min nTPM: 69.8
P10809_1014
69.8
P10809_1026
92.1
P10809_1045
82.7
P10809_1064
87.0
P10809_1086
84.9
P10809_1113
78.0
Memory CD8 T-cell nTPM: 92.2
Samples: 5
Max nTPM: 134.3
Min nTPM: 68.6
P10809_1012
68.6
P10809_1027
134.3
P10809_1046
94.4
P10809_1065
85.6
P10809_1111
78.1
Naive CD4 T-cell nTPM: 68.0
Samples: 6
Max nTPM: 82.8
Min nTPM: 53.5
P10809_1015
53.5
P10809_1030
77.3
P10809_1049
82.8
P10809_1068
67.2
P10809_1085
69.4
P10809_1112
57.8
Naive CD8 T-cell nTPM: 81.8
Samples: 6
Max nTPM: 108.0
Min nTPM: 54.8
P10809_1016
61.5
P10809_1031
108.0
P10809_1050
97.7
P10809_1069
76.1
P10809_1087
92.5
P10809_1110
54.8
T-reg nTPM: 108.1
Samples: 6
Max nTPM: 154.9
Min nTPM: 69.6
P10809_1018
90.8
P10809_1037
114.0
P10809_1056
154.9
P10809_1075
69.6
P10809_1094
108.8
P10809_1106
110.6
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
57.4
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 42.4
Samples: 4
Max nTPM: 59.6
Min nTPM: 25.4
RHH5202_R3573
59.6
RHH5230_R3602
37.0
RHH5259_R3631
25.4
RHH5288_R3660
47.4
Effector memory CD8 T-cell nTPM: 40.4
Samples: 4
Max nTPM: 41.1
Min nTPM: 39.7
RHH5203_R3574
41.1
RHH5231_R3603
40.0
RHH5260_R3632
39.7
RHH5289_R3661
40.9
MAIT T-cell nTPM: 41.3
Samples: 4
Max nTPM: 48.3
Min nTPM: 31.6
RHH5233_R3605
40.2
RHH5205_R3576
31.6
RHH5262_R3634
48.3
RHH5297_R3663
44.9
Memory CD4 T-cell TFH nTPM: 36.4
Samples: 4
Max nTPM: 46.5
Min nTPM: 25.7
RHH5300_R3666
35.4
RHH5236_R3608
46.5
RHH5265_R3637
38.0
RHH5208_R3579
25.7
Memory CD4 T-cell Th1 nTPM: 44.4
Samples: 4
Max nTPM: 65.5
Min nTPM: 25.7
RHH5210_R3581
41.2
RHH5302_R3668
65.5
RHH5238_R3610
25.7
RHH5267_R3639
45.2
Memory CD4 T-cell Th1/Th17 nTPM: 40.6
Samples: 4
Max nTPM: 46.0
Min nTPM: 28.6
RHH5303_R3669
43.8
RHH5211_R3582
46.0
RHH5239_R3611
28.6
RHH5268_R3640
43.9
Memory CD4 T-cell Th17 nTPM: 35.5
Samples: 4
Max nTPM: 38.5
Min nTPM: 26.7
RHH5304_R3670
38.2
RHH5212_R3583
26.7
RHH5240_R3612
38.4
RHH5269_R3641
38.5
Memory CD4 T-cell Th2 nTPM: 44.1
Samples: 4
Max nTPM: 55.5
Min nTPM: 37.9
RHH5305_R3671
55.5
RHH5213_R3584
45.0
RHH5241_R3613
37.9
RHH5270_R3642
38.1
Naive CD4 T-cell nTPM: 37.6
Samples: 4
Max nTPM: 51.4
Min nTPM: 29.3
RHH5306_R3672
51.4
RHH5214_R3585
36.7
RHH5242_R3614
29.3
RHH5271_R3643
32.8
Naive CD8 T-cell nTPM: 29.4
Samples: 4
Max nTPM: 37.8
Min nTPM: 24.0
RHH5201_R3572
28.3
RHH5229_R3601
24.0
RHH5258_R3630
27.3
RHH5287_R3659
37.8
Non-Vd2 gdTCR nTPM: 51.1
Samples: 4
Max nTPM: 66.6
Min nTPM: 35.1
RHH5235_R3607
35.1
RHH5264_R3636
53.7
RHH5207_R3578
49.1
RHH5299_R3665
66.6
T-reg nTPM: 37.7
Samples: 4
Max nTPM: 47.8
Min nTPM: 28.3
RHH5301_R3667
47.8
RHH5237_R3609
45.1
RHH5266_R3638
29.6
RHH5209_R3580
28.3
Terminal effector memory CD4 T-cell nTPM: 40.8
Samples: 2
Max nTPM: 51.2
Min nTPM: 30.3
RHH5243_R3615
30.3
RHH5272_R3644
51.2
Terminal effector memory CD8 T-cell nTPM: 57.4
Samples: 4
Max nTPM: 73.2
Min nTPM: 43.9
RHH5232_R3604
57.4
RHH5204_R3575
73.2
RHH5261_R3633
55.0
RHH5296_R3662
43.9
Vd2 gdTCR nTPM: 49.5
Samples: 4
Max nTPM: 73.1
Min nTPM: 34.8
RHH5234_R3606
34.8
RHH5206_R3577
73.1
RHH5263_R3635
39.6
RHH5298_R3664
50.5
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
