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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA Brain:
183.0
nTPM
FANTOM5:
174.1
Scaled Tags Per Million
Pig:
110.8
nTPM
Allen mouse:
3.5
Expression energy
PONS - HPA Brain RNA-seq
Max nTPM
183.0
Sample id
Sample description
nTPM
Anterior cochlear nucleus, ventral nTPM: 137.2
1984
Male, age 76, both hemispheres
170.0
2090
Male, age 80, both hemispheres
151.9
2301
Female, age 85, both hemispheres
120.8
2188
Female, age 91, both hemispheres
106.1
Dorsal cochlear nucleus nTPM: 167.0
2370
Male, age 61, both hemispheres
192.3
2802
Male, age 74, right hemisphere
178.7
2378
Male, age 80, both hemispheres
168.3
2058
Male, age 76, both hemispheres
162.2
2187
Female, age 91, both hemispheres
133.8
Dorsal tegmental nucleus nTPM: 169.6
2358
Male, age 61, both hemispheres
206.4
2083
Male, age 80, both hemispheres
163.9
2326
Male, age 74, both hemispheres
159.8
1936
Male, age 76, left hemisphere
148.2
Dorsolateral tegmental area nTPM: 183.0
2337
Male, age 61, both hemispheres
308.4
2654
Male, age 80, both hemispheres
162.6
2141
Male, age 76, both hemispheres
160.1
2360
Male, age 74, both hemispheres
147.9
2751
Female, age 85, both hemispheres
136.1
Kolliker-Fuse nucleus nTPM: 152.2
2315
Male, age 76, right hemisphere
202.5
2163
Male, age 80, both hemispheres
150.6
2793
Female, age 91, left hemisphere
103.4
Lateral lemniscal nuclei nTPM: 122.9
2746
Female, age 85, left hemisphere
142.1
2169
Male, age 76, both hemispheres
132.3
2453
Male, age 74, right hemisphere
124.1
2036
Male, age 80, both hemispheres
113.6
2320
Female, age 91, left hemisphere
102.2
Lateral parabrachial nucleus nTPM: 150.1
2139
Female, age 85, right hemisphere
174.2
2013
Male, age 80, both hemispheres
152.7
2790
Male, age 61, both hemispheres
138.8
2792
Male, age 76, both hemispheres
134.7
Lateral vestibular nucleus nTPM: 167.2
2311
Male, age 80, both hemispheres
174.6
2184
Male, age 76, both hemispheres
159.9
Locus coeruleus nTPM: 159.6
2317
Female, age 72, unknown
176.8
2123
Female, age 91, both hemispheres
173.6
1980
Male, age 76, both hemispheres
171.6
2014
Male, age 55, unknown
161.8
2162
Male, age 80, both hemispheres
154.3
2788
Male, age 74, unknown
140.6
2720
Male, age 74, both hemispheres
138.9
Medial parabrachial nucleus nTPM: 154.2
2156
Male, age 61, both hemispheres
181.8
2463
Female, age 85, right hemisphere
156.4
2786
Male, age 76, both hemispheres
154.8
2854
Male, age 80, both hemispheres
142.0
2170
Female, age 91, both hemispheres
135.8
Medial periolivary nuclei nTPM: 125.7
2081
Male, age 80, both hemispheres
148.1
2171
Female, age 85, both hemispheres
128.2
2791
Male, age 74, right hemisphere
121.2
2063
Male, age 76, both hemispheres
120.9
2458
Female, age 91, both hemispheres
109.8
Motor facial nucleus nTPM: 130.4
2795
Female, age 91, both hemispheres
180.8
2126
Male, age 61, both hemispheres
139.3
2062
Male, age 76, both hemispheres
134.3
2365
Male, age 74, right hemisphere
123.3
2327
Male, age 80, both hemispheres
104.6
2697
Female, age 85, both hemispheres
100.2
Motor trigeminal nucleus nTPM: 138.6
2335
Male, age 61, both hemispheres
195.0
2309
Male, age 76, both hemispheres
136.7
2079
Male, age 80, both hemispheres
133.1
2560
Male, age 74, both hemispheres
120.4
2321
Female, age 91, both hemispheres
108.0
Nuclei of the trapezoid body nTPM: 125.3
2368
Female, age 91, both hemispheres
136.1
1983
Male, age 76, both hemispheres
131.7
2735
Female, age 85, both hemispheres
125.7
2159
Male, age 61, both hemispheres
117.5
2166
Male, age 80, both hemispheres
115.3
Nucleus raphe magnus nTPM: 125.9
2051
Male, age 76, both hemispheres
164.0
2455
Male, age 74, both hemispheres
132.8
2328
Male, age 80, both hemispheres
120.8
2172
Female, age 85, both hemispheres
115.7
2160
Male, age 61, both hemispheres
114.0
2459
Female, age 91, both hemispheres
108.0
Paramedian reticular nucleus nTPM: 136.5
2057
Male, age 80, both hemispheres
158.4
2313
Male, age 61, both hemispheres
153.4
2050
Female, age 85, both hemispheres
123.9
2052
Male, age 76, both hemispheres
110.6
Pedunculopontine tegmental nucleus nTPM: 177.6
2338
Male, age 61, both hemispheres
199.3
1921
Female, age 85, both hemispheres
173.1
2334
Male, age 80, both hemispheres
160.3
Pontine nuclei nTPM: 118.1
2115
Male, age 80, left hemisphere
159.3
2787
Female, age 85, both hemispheres
133.9
1863
Male, age 55, unknown
130.0
1968
Male, age 76, left hemisphere
128.5
2109
Female, age 72, unknown
108.3
2319
Female, age 91, both hemispheres
105.5
2727
Male, age 61, right hemisphere
95.9
2454
Male, age 74, left hemisphere
83.3
Pontine raphe nucleus nTPM: 133.9
2853
Male, age 76, midline
139.4
2122
Female, age 85, midline
128.4
Posteroventral cochlear nucleus nTPM: 142.2
2371
Male, age 61, both hemispheres
180.4
2752
Female, age 85, both hemispheres
155.9
2341
Male, age 80, both hemispheres
135.2
2070
Male, age 76, both hemispheres
133.3
2135
Female, age 91, both hemispheres
106.3
Principal sensory trigeminal nucleus nTPM: 125.1
2324
Male, age 76, both hemispheres
171.5
2158
Male, age 61, both hemispheres
119.6
2008
Male, age 80, left hemisphere
112.6
2367
Female, age 91, left hemisphere
96.6
Reticular pontine nucleus, caudal nTPM: 116.8
2092
Male, age 76, both hemispheres
134.0
2332
Male, age 80, right hemisphere
118.7
2559
Male, age 74, both hemispheres
108.5
2457
Female, age 91, both hemispheres
105.8
Reticular pontine nucleus, oral nTPM: 122.8
1939
Male, age 80, both hemispheres
162.5
2167
Male, age 76, both hemispheres
139.8
2012
Female, age 85, both hemispheres
130.1
2366
Female, age 91, both hemispheres
95.9
2361
Male, age 74, both hemispheres
85.6
Reticulotegmental nucleus nTPM: 149.7
2333
Male, age 80, both hemispheres
169.2
2322
Female, age 91, both hemispheres
154.9
2452
Male, age 74, both hemispheres
144.1
2325
Male, age 76, both hemispheres
130.6
Spinal trigeminal nucleus, oral nTPM: 148.9
1978
Male, age 76, both hemispheres
151.6
2737
Female, age 85, both hemispheres
149.9
2164
Male, age 80, both hemispheres
145.3
Subcoeruleus area nTPM: 152.0
2323
Female, age 91, left hemisphere
171.1
2451
Male, age 74, both hemispheres
169.2
2089
Male, age 76, left hemisphere
144.8
1958
Male, age 80, both hemispheres
138.2
2369
Female, age 85, left hemisphere
136.6
Superior olive nTPM: 117.1
2364
Male, age 74, right hemisphere
123.9
2020
Male, age 76, both hemispheres
120.2
2561
Female, age 91, both hemispheres
118.6
2329
Male, age 80, right hemisphere
115.8
1875
Female, age 85, both hemispheres
106.8
Ventral periolivary nuclei nTPM: 121.7
2130
Female, age 85, both hemispheres
143.4
2165
Male, age 80, both hemispheres
128.4
2794
Female, age 91, left hemisphere
109.5
2023
Male, age 76, both hemispheres
105.3
Ventrolateral tegmental area, A5 NE cell group nTPM: 140.3
2359
Male, age 61, both hemispheres
181.8
2161
Male, age 80, both hemispheres
147.6
2840
Female, age 85, both hemispheres
133.0
1959
Male, age 76, both hemispheres
131.0
2456
Female, age 91, both hemispheres
128.2
2449
Male, age 74, both hemispheres
120.0
PONS - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
110.8
Pig sample
Sample description
nTPM
Pons nTPM: 110.8
Samples: 4
Max nTPM: 135.1
Min nTPM: 99.6
Sample A
Female
135.1
Sample B
Female
106.5
Sample C
Male
101.8
Sample D
Male
99.6
PONS - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
The Human Protein Atlas project is funded
