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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
293.7
nTPM
Monaco:
827.7
nTPM
Schmiedel:
44.9
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
293.7
HPA sample
nTPM
gdT-cell nTPM: 242.2
Samples: 6
Max nTPM: 365.4
Min nTPM: 148.1
P10809_1007
283.2
P10809_1022
365.4
P10809_1041
249.9
P10809_1060
148.1
P10809_1077
187.6
P10809_1098
219.1
MAIT T-cell nTPM: 267.1
Samples: 6
Max nTPM: 319.6
Min nTPM: 211.1
P10809_1006
265.6
P10809_1024
319.6
P10809_1043
283.6
P10809_1062
270.7
P10809_1083
211.1
P10809_1097
252.2
Memory CD4 T-cell nTPM: 230.6
Samples: 6
Max nTPM: 265.7
Min nTPM: 183.8
P10809_1014
251.8
P10809_1026
239.4
P10809_1045
265.7
P10809_1064
215.2
P10809_1086
183.8
P10809_1113
227.7
Memory CD8 T-cell nTPM: 225.3
Samples: 5
Max nTPM: 282.4
Min nTPM: 160.4
P10809_1012
282.4
P10809_1027
256.9
P10809_1046
257.2
P10809_1065
169.4
P10809_1111
160.4
Naive CD4 T-cell nTPM: 241.7
Samples: 6
Max nTPM: 271.7
Min nTPM: 203.4
P10809_1015
265.9
P10809_1030
271.7
P10809_1049
203.4
P10809_1068
260.9
P10809_1085
205.8
P10809_1112
242.7
Naive CD8 T-cell nTPM: 192.9
Samples: 6
Max nTPM: 213.6
Min nTPM: 172.9
P10809_1016
213.6
P10809_1031
210.9
P10809_1050
182.6
P10809_1069
204.1
P10809_1087
173.5
P10809_1110
172.9
T-reg nTPM: 293.7
Samples: 6
Max nTPM: 407.1
Min nTPM: 222.6
P10809_1018
407.1
P10809_1037
398.9
P10809_1056
222.6
P10809_1075
231.3
P10809_1094
251.9
P10809_1106
250.4
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
827.7
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 417.5
Samples: 4
Max nTPM: 480.1
Min nTPM: 275.7
RHH5202_R3573
465.3
RHH5230_R3602
480.1
RHH5259_R3631
275.7
RHH5288_R3660
449.0
Effector memory CD8 T-cell nTPM: 827.7
Samples: 4
Max nTPM: 1193.0
Min nTPM: 512.1
RHH5203_R3574
1193.0
RHH5231_R3603
720.9
RHH5260_R3632
512.1
RHH5289_R3661
884.7
MAIT T-cell nTPM: 547.9
Samples: 4
Max nTPM: 583.3
Min nTPM: 506.8
RHH5233_R3605
547.6
RHH5205_R3576
506.8
RHH5262_R3634
583.3
RHH5297_R3663
553.8
Memory CD4 T-cell TFH nTPM: 561.2
Samples: 4
Max nTPM: 608.1
Min nTPM: 505.9
RHH5300_R3666
505.9
RHH5236_R3608
559.2
RHH5265_R3637
571.4
RHH5208_R3579
608.1
Memory CD4 T-cell Th1 nTPM: 573.9
Samples: 4
Max nTPM: 786.6
Min nTPM: 437.1
RHH5210_R3581
492.9
RHH5302_R3668
786.6
RHH5238_R3610
437.1
RHH5267_R3639
579.0
Memory CD4 T-cell Th1/Th17 nTPM: 484.6
Samples: 4
Max nTPM: 608.1
Min nTPM: 338.0
RHH5303_R3669
608.1
RHH5211_R3582
585.3
RHH5239_R3611
338.0
RHH5268_R3640
407.1
Memory CD4 T-cell Th17 nTPM: 520.4
Samples: 4
Max nTPM: 565.7
Min nTPM: 478.6
RHH5304_R3670
565.7
RHH5212_R3583
512.6
RHH5240_R3612
524.7
RHH5269_R3641
478.6
Memory CD4 T-cell Th2 nTPM: 578.4
Samples: 4
Max nTPM: 628.7
Min nTPM: 542.5
RHH5305_R3671
545.0
RHH5213_R3584
628.7
RHH5241_R3613
597.2
RHH5270_R3642
542.5
Naive CD4 T-cell nTPM: 559.7
Samples: 4
Max nTPM: 626.2
Min nTPM: 509.6
RHH5306_R3672
626.2
RHH5214_R3585
509.6
RHH5242_R3614
545.1
RHH5271_R3643
557.9
Naive CD8 T-cell nTPM: 348.9
Samples: 4
Max nTPM: 420.8
Min nTPM: 182.6
RHH5201_R3572
403.3
RHH5229_R3601
182.6
RHH5258_R3630
388.8
RHH5287_R3659
420.8
Non-Vd2 gdTCR nTPM: 631.5
Samples: 4
Max nTPM: 711.1
Min nTPM: 530.3
RHH5235_R3607
530.3
RHH5264_R3636
589.7
RHH5207_R3578
711.1
RHH5299_R3665
695.0
T-reg nTPM: 687.1
Samples: 4
Max nTPM: 776.8
Min nTPM: 603.8
RHH5301_R3667
737.3
RHH5237_R3609
776.8
RHH5266_R3638
630.5
RHH5209_R3580
603.8
Terminal effector memory CD4 T-cell nTPM: 649.6
Samples: 2
Max nTPM: 705.7
Min nTPM: 593.4
RHH5243_R3615
593.4
RHH5272_R3644
705.7
Terminal effector memory CD8 T-cell nTPM: 620.2
Samples: 4
Max nTPM: 757.1
Min nTPM: 457.5
RHH5232_R3604
732.8
RHH5204_R3575
533.2
RHH5261_R3633
457.5
RHH5296_R3662
757.1
Vd2 gdTCR nTPM: 537.9
Samples: 4
Max nTPM: 734.1
Min nTPM: 432.1
RHH5234_R3606
512.8
RHH5206_R3577
734.1
RHH5263_R3635
432.1
RHH5298_R3664
472.6
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.