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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
47.0
nTPM
Monaco:
221.3
nTPM
Schmiedel:
267.3
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
47.0
HPA sample
nTPM
gdT-cell nTPM: 41.3
Samples: 6
Max nTPM: 60.7
Min nTPM: 33.3
P10809_1007
33.3
P10809_1022
46.8
P10809_1041
60.7
P10809_1060
34.6
P10809_1077
33.9
P10809_1098
38.6
MAIT T-cell nTPM: 47.0
Samples: 6
Max nTPM: 54.3
Min nTPM: 42.1
P10809_1006
52.8
P10809_1024
46.2
P10809_1043
42.7
P10809_1062
42.1
P10809_1083
43.7
P10809_1097
54.3
Memory CD4 T-cell nTPM: 39.0
Samples: 6
Max nTPM: 44.4
Min nTPM: 30.4
P10809_1014
44.4
P10809_1026
41.1
P10809_1045
35.6
P10809_1064
30.4
P10809_1086
43.4
P10809_1113
39.3
Memory CD8 T-cell nTPM: 38.2
Samples: 5
Max nTPM: 42.5
Min nTPM: 30.0
P10809_1012
40.4
P10809_1027
38.0
P10809_1046
42.5
P10809_1065
30.0
P10809_1111
40.2
Naive CD4 T-cell nTPM: 41.8
Samples: 6
Max nTPM: 52.5
Min nTPM: 32.1
P10809_1015
52.5
P10809_1030
41.8
P10809_1049
41.0
P10809_1068
40.9
P10809_1085
32.1
P10809_1112
42.4
Naive CD8 T-cell nTPM: 37.1
Samples: 6
Max nTPM: 43.7
Min nTPM: 29.9
P10809_1016
43.7
P10809_1031
41.2
P10809_1050
32.0
P10809_1069
35.5
P10809_1087
40.0
P10809_1110
29.9
T-reg nTPM: 36.2
Samples: 6
Max nTPM: 52.7
Min nTPM: 16.7
P10809_1018
33.1
P10809_1037
52.7
P10809_1056
48.0
P10809_1075
16.7
P10809_1094
26.1
P10809_1106
40.5
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
221.3
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 185.6
Samples: 4
Max nTPM: 208.9
Min nTPM: 159.8
RHH5202_R3573
208.9
RHH5230_R3602
198.9
RHH5259_R3631
159.8
RHH5288_R3660
174.7
Effector memory CD8 T-cell nTPM: 161.0
Samples: 4
Max nTPM: 176.8
Min nTPM: 151.1
RHH5203_R3574
155.2
RHH5231_R3603
151.1
RHH5260_R3632
176.8
RHH5289_R3661
160.7
MAIT T-cell nTPM: 221.3
Samples: 4
Max nTPM: 253.4
Min nTPM: 178.6
RHH5233_R3605
253.4
RHH5205_R3576
239.3
RHH5262_R3634
213.8
RHH5297_R3663
178.6
Memory CD4 T-cell TFH nTPM: 164.5
Samples: 4
Max nTPM: 187.5
Min nTPM: 132.6
RHH5300_R3666
132.6
RHH5236_R3608
187.5
RHH5265_R3637
157.6
RHH5208_R3579
180.1
Memory CD4 T-cell Th1 nTPM: 151.5
Samples: 4
Max nTPM: 158.5
Min nTPM: 136.7
RHH5210_R3581
158.5
RHH5302_R3668
136.7
RHH5238_R3610
157.3
RHH5267_R3639
153.4
Memory CD4 T-cell Th1/Th17 nTPM: 155.7
Samples: 4
Max nTPM: 171.7
Min nTPM: 134.8
RHH5303_R3669
171.7
RHH5211_R3582
167.1
RHH5239_R3611
149.3
RHH5268_R3640
134.8
Memory CD4 T-cell Th17 nTPM: 167.6
Samples: 4
Max nTPM: 194.0
Min nTPM: 138.6
RHH5304_R3670
160.2
RHH5212_R3583
177.4
RHH5240_R3612
194.0
RHH5269_R3641
138.6
Memory CD4 T-cell Th2 nTPM: 174.3
Samples: 4
Max nTPM: 227.5
Min nTPM: 142.4
RHH5305_R3671
149.8
RHH5213_R3584
227.5
RHH5241_R3613
177.3
RHH5270_R3642
142.4
Naive CD4 T-cell nTPM: 152.9
Samples: 4
Max nTPM: 177.1
Min nTPM: 126.7
RHH5306_R3672
126.7
RHH5214_R3585
148.9
RHH5242_R3614
177.1
RHH5271_R3643
159.0
Naive CD8 T-cell nTPM: 194.8
Samples: 4
Max nTPM: 235.1
Min nTPM: 180.2
RHH5201_R3572
182.9
RHH5229_R3601
235.1
RHH5258_R3630
180.9
RHH5287_R3659
180.2
Non-Vd2 gdTCR nTPM: 172.3
Samples: 4
Max nTPM: 217.1
Min nTPM: 105.5
RHH5235_R3607
217.1
RHH5264_R3636
184.2
RHH5207_R3578
182.5
RHH5299_R3665
105.5
T-reg nTPM: 160.1
Samples: 4
Max nTPM: 182.6
Min nTPM: 135.6
RHH5301_R3667
135.6
RHH5237_R3609
151.6
RHH5266_R3638
170.6
RHH5209_R3580
182.6
Terminal effector memory CD4 T-cell nTPM: 143.2
Samples: 2
Max nTPM: 150.0
Min nTPM: 136.4
RHH5243_R3615
136.4
RHH5272_R3644
150.0
Terminal effector memory CD8 T-cell nTPM: 143.4
Samples: 4
Max nTPM: 150.7
Min nTPM: 135.0
RHH5232_R3604
150.7
RHH5204_R3575
135.0
RHH5261_R3633
139.6
RHH5296_R3662
148.3
Vd2 gdTCR nTPM: 178.1
Samples: 4
Max nTPM: 230.4
Min nTPM: 133.8
RHH5234_R3606
230.4
RHH5206_R3577
133.8
RHH5263_R3635
197.6
RHH5298_R3664
150.5
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
