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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
62.9
nTPM
Monaco:
23.4
nTPM
Schmiedel:
168.9
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
62.9
HPA sample
nTPM
gdT-cell nTPM: 22.7
Samples: 6
Max nTPM: 31.3
Min nTPM: 15.9
P10809_1007
18.9
P10809_1022
15.9
P10809_1041
25.9
P10809_1060
24.9
P10809_1077
31.3
P10809_1098
19.3
MAIT T-cell nTPM: 25.4
Samples: 6
Max nTPM: 35.5
Min nTPM: 11.6
P10809_1006
23.3
P10809_1024
32.2
P10809_1043
11.6
P10809_1062
26.3
P10809_1083
35.5
P10809_1097
23.3
Memory CD4 T-cell nTPM: 30.5
Samples: 6
Max nTPM: 37.0
Min nTPM: 21.8
P10809_1014
37.0
P10809_1026
29.7
P10809_1045
21.8
P10809_1064
34.1
P10809_1086
31.5
P10809_1113
28.9
Memory CD8 T-cell nTPM: 21.9
Samples: 5
Max nTPM: 27.8
Min nTPM: 15.5
P10809_1012
24.8
P10809_1027
25.5
P10809_1046
15.5
P10809_1065
27.8
P10809_1111
15.8
Naive CD4 T-cell nTPM: 16.4
Samples: 6
Max nTPM: 21.2
Min nTPM: 11.2
P10809_1015
17.8
P10809_1030
11.2
P10809_1049
14.6
P10809_1068
21.2
P10809_1085
17.4
P10809_1112
16.1
Naive CD8 T-cell nTPM: 21.9
Samples: 6
Max nTPM: 32.7
Min nTPM: 11.6
P10809_1016
22.1
P10809_1031
19.1
P10809_1050
14.2
P10809_1069
31.4
P10809_1087
32.7
P10809_1110
11.6
T-reg nTPM: 62.9
Samples: 6
Max nTPM: 79.5
Min nTPM: 46.1
P10809_1018
79.5
P10809_1037
70.2
P10809_1056
46.1
P10809_1075
68.7
P10809_1094
60.0
P10809_1106
52.7
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
23.4
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 13.3
Samples: 4
Max nTPM: 22.8
Min nTPM: 7.4
RHH5202_R3573
12.2
RHH5230_R3602
10.9
RHH5259_R3631
7.4
RHH5288_R3660
22.8
Effector memory CD8 T-cell nTPM: 19.2
Samples: 4
Max nTPM: 32.8
Min nTPM: 7.2
RHH5203_R3574
32.8
RHH5231_R3603
7.2
RHH5260_R3632
15.4
RHH5289_R3661
21.3
MAIT T-cell nTPM: 10.6
Samples: 4
Max nTPM: 15.2
Min nTPM: 5.3
RHH5233_R3605
10.3
RHH5205_R3576
11.5
RHH5262_R3634
5.3
RHH5297_R3663
15.2
Memory CD4 T-cell TFH nTPM: 10.8
Samples: 4
Max nTPM: 15.1
Min nTPM: 6.7
RHH5300_R3666
11.1
RHH5236_R3608
15.1
RHH5265_R3637
6.7
RHH5208_R3579
10.1
Memory CD4 T-cell Th1 nTPM: 10.0
Samples: 4
Max nTPM: 12.9
Min nTPM: 7.4
RHH5210_R3581
7.4
RHH5302_R3668
12.9
RHH5238_R3610
8.3
RHH5267_R3639
11.3
Memory CD4 T-cell Th1/Th17 nTPM: 11.2
Samples: 4
Max nTPM: 13.2
Min nTPM: 7.5
RHH5303_R3669
12.8
RHH5211_R3582
11.3
RHH5239_R3611
7.5
RHH5268_R3640
13.2
Memory CD4 T-cell Th17 nTPM: 8.6
Samples: 4
Max nTPM: 11.7
Min nTPM: 6.3
RHH5304_R3670
11.7
RHH5212_R3583
7.4
RHH5240_R3612
9.1
RHH5269_R3641
6.3
Memory CD4 T-cell Th2 nTPM: 7.0
Samples: 4
Max nTPM: 10.4
Min nTPM: 3.8
RHH5305_R3671
10.4
RHH5213_R3584
5.1
RHH5241_R3613
3.8
RHH5270_R3642
8.7
Naive CD4 T-cell nTPM: 4.5
Samples: 4
Max nTPM: 7.5
Min nTPM: 0.7
RHH5306_R3672
5.1
RHH5214_R3585
7.5
RHH5242_R3614
4.8
RHH5271_R3643
0.7
Naive CD8 T-cell nTPM: 4.9
Samples: 4
Max nTPM: 10.3
Min nTPM: 1.8
RHH5201_R3572
10.3
RHH5229_R3601
1.8
RHH5258_R3630
3.6
RHH5287_R3659
3.8
Non-Vd2 gdTCR nTPM: 22.9
Samples: 4
Max nTPM: 36.2
Min nTPM: 13.4
RHH5235_R3607
13.4
RHH5264_R3636
22.1
RHH5207_R3578
36.2
RHH5299_R3665
19.9
T-reg nTPM: 14.3
Samples: 4
Max nTPM: 18.0
Min nTPM: 9.2
RHH5301_R3667
18.0
RHH5237_R3609
14.3
RHH5266_R3638
15.6
RHH5209_R3580
9.2
Terminal effector memory CD4 T-cell nTPM: 6.7
Samples: 2
Max nTPM: 8.9
Min nTPM: 4.5
RHH5243_R3615
8.9
RHH5272_R3644
4.5
Terminal effector memory CD8 T-cell nTPM: 23.4
Samples: 4
Max nTPM: 40.2
Min nTPM: 10.8
RHH5232_R3604
10.8
RHH5204_R3575
40.2
RHH5261_R3633
14.4
RHH5296_R3662
28.1
Vd2 gdTCR nTPM: 19.1
Samples: 4
Max nTPM: 27.6
Min nTPM: 7.7
RHH5234_R3606
7.7
RHH5206_R3577
27.6
RHH5263_R3635
23.3
RHH5298_R3664
17.8
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
