HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:29.1 nTPM
HPA Brain:24.7 nTPM
GTEx:29.1 nTPM
FANTOM5:99.6 Scaled Tags Per Million
Pig:42.3 nTPM
Mouse:44.6 nTPM
Allen mouse:0.9 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 24.7
Sample id Sample description nTPM
Hippocampus
nTPM: 23.0
1898 Male, age 80, left hemisphere 26.9
1855 Male, age 76, left hemisphere 24.9
2529 Female, age 94, left hemisphere 24.4
1911 Female, age 85, right hemisphere 22.1
2621 Female, age 67, right hemisphere 20.1
2148 Female, age 91, left hemisphere 19.7
Dentate gyrus
nTPM: 24.7
2530 Female, age 94, left hemisphere 35.3
2010 Male, age 76, both hemispheres 29.2
2528 Male, age 74, both hemispheres 24.0
2246 Female, age 85, both hemispheres 23.6
2531 Female, age 67, both hemispheres 19.9
1927 Female, age 91, both hemispheres 16.1
Entorhinal gyrus
nTPM: 22.8
2117 Female, age 91, right hemisphere 30.5
1787 Male, age 76, left hemisphere 26.5
2764 Male, age 80, right hemisphere 25.8
1938 Female, age 85, left hemisphere 23.7
2613 Female, age 94, left hemisphere 16.2
2686 Male, age 75, right hemisphere 14.1
Hippocampus, CA1
nTPM: 20.2
2749 Male, age 80, left hemisphere 25.7
1873 Female, age 85, both hemispheres 21.7
2045 Male, age 76, both hemispheres 19.2
2527 Male, age 74, both hemispheres 19.2
2082 Female, age 91, right hemisphere 15.5
Hippocampus, CA2
nTPM: 23.7
1940 Female, age 85, left hemisphere 27.6
2249 Male, age 74, both hemispheres 27.5
2437 Female, age 94, left hemisphere 26.0
1892 Male, age 76, both hemispheres 24.9
1963 Male, age 80, left hemisphere 20.5
2113 Female, age 91, right hemisphere 16.0
Hippocampus, CA3
nTPM: 23.8
2620 Female, age 94, left hemisphere 37.8
1891 Female, age 85, both hemispheres 25.8
2436 Male, age 74, both hemispheres 24.5
1867 Male, age 76, both hemispheres 24.2
2137 Male, age 80, left hemisphere 16.7
2861 Female, age 67, both hemispheres 13.6
Parahippocampal cortex
nTPM: 19.0
2532 Female, age 72, left hemisphere 25.5
1990 Female, age 91, right hemisphere 24.6
1850 Male, age 80, both hemispheres 23.9
1933 Female, age 85, both hemispheres 19.7
2245 Female, age 91, both hemispheres 19.0
2018 Male, age 76, both hemispheres 18.7
2693 Female, age 94, both hemispheres 18.3
2692 Male, age 74, both hemispheres 18.1
2250 Female, age 67, right hemisphere 15.7
2622 Female, age 67, right hemisphere 6.6
Perirhinal gyrus
nTPM: 21.1
1794 Male, age 80, right hemisphere 26.5
2521 Female, age 94, right hemisphere 22.9
2848 Male, age 76, right hemisphere 20.9
1841 Female, age 85, right hemisphere 18.4
1847 Female, age 91, left hemisphere 17.0
Subiculum
nTPM: 24.1
1901 Male, age 80, both hemispheres 31.3
2619 Male, age 74, both hemispheres 27.3
1977 Female, age 85, both hemispheres 26.2
2438 Female, age 94, left hemisphere 26.1
2042 Male, age 76, both hemispheres 20.1
2729 Female, age 91, right hemisphere 13.6

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 29.1
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 29.1
Samples: 197

Max nTPM: 58.9
Min nTPM: 13.5
Std nTPM: 8.2
Median nTPM: 28.3
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 58.9
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 55.1
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 51.7
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 50.1
GTEX-OHPN-0011-R1A-SM-2I5GB 60-69 years, female 49.1
GTEX-1C6VQ-0011-R1a-SM-7P8Q2 50-59 years, male 49.0
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 46.7
GTEX-1LB8K-0011-R1b-SM-EZ6MV 50-59 years, male 45.5
GTEX-15UF6-0011-R1a-SM-9QEGH 70-79 years, female 44.8
GTEX-13OVL-0011-R1a-SM-5L3H5 50-59 years, male 44.6
GTEX-17MF6-0011-R1a-SM-72D6O 40-49 years, male 44.1
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 99.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 99.6
FF:10169-103B7 60 years, female 101.7
FF:10153-102I9 76 years, female 97.4

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 42.3
Pig sample Sample description nTPM
Subiculum
nTPM: 33.3
Samples: 4

Max nTPM: 39.0
Min nTPM: 30.6
Sample A Female 39.0
Sample B Female 30.6
Sample C Male 32.7
Sample D Male 31.0
Dorsal hippocampus
nTPM: 42.3
Samples: 4

Max nTPM: 52.4
Min nTPM: 30.9
Sample A Female 52.4
Sample B Female 44.5
Sample C Male 41.4
Sample D Male 30.9
Entorhinal cortex
nTPM: 32.9
Samples: 4

Max nTPM: 40.7
Min nTPM: 29.8
Sample A Female 40.7
Sample B Female 30.3
Sample C Male 29.8
Sample D Male 30.6
Ventral hippocampus
nTPM: 41.7
Samples: 4

Max nTPM: 49.1
Min nTPM: 27.4
Sample A Female 42.9
Sample B Female 27.4
Sample C Male 49.1
Sample D Male 47.4

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 44.6
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 44.2
Samples: 4

Max nTPM: 54.9
Min nTPM: 38.7
Sample A Male 42.1
Sample B Male 38.7
Sample C Female 41.1
Sample D Female 54.9
Hippocampal formation
nTPM: 44.6
Samples: 4

Max nTPM: 47.1
Min nTPM: 39.4
Sample A Male 39.4
Sample B Male 45.5
Sample C Female 46.5
Sample D Female 47.1

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.9
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.9
1810 Antisense, RP_040604_01_B08, Mouse strain C57BL/6J (56 days, male) 0.9
1811 Antisense, RP_040604_01_B08, Mouse strain C57BL/6J (56 days, male) 0.6

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