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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
394.5
nTPM
Monaco:
29.1
nTPM
Schmiedel:
121.2
TPM
T-CELLS - Annotated protein expression
Pending normal tissue analysis
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
394.5
HPA sample
nTPM
gdT-cell nTPM: 238.1
Samples: 6
Max nTPM: 314.1
Min nTPM: 177.2
P10809_1007
242.8
P10809_1022
177.2
P10809_1041
300.5
P10809_1060
201.3
P10809_1077
314.1
P10809_1098
192.5
MAIT T-cell nTPM: 225.5
Samples: 6
Max nTPM: 244.2
Min nTPM: 193.5
P10809_1006
193.5
P10809_1024
214.6
P10809_1043
244.2
P10809_1062
238.7
P10809_1083
237.2
P10809_1097
224.7
Memory CD4 T-cell nTPM: 286.8
Samples: 6
Max nTPM: 340.8
Min nTPM: 240.8
P10809_1014
288.0
P10809_1026
291.1
P10809_1045
240.8
P10809_1064
340.8
P10809_1086
302.2
P10809_1113
257.6
Memory CD8 T-cell nTPM: 268.8
Samples: 5
Max nTPM: 312.6
Min nTPM: 239.2
P10809_1012
239.2
P10809_1027
312.6
P10809_1046
246.3
P10809_1065
304.7
P10809_1111
241.1
Naive CD4 T-cell nTPM: 228.5
Samples: 6
Max nTPM: 252.8
Min nTPM: 200.8
P10809_1015
250.1
P10809_1030
224.6
P10809_1049
226.4
P10809_1068
252.8
P10809_1085
216.2
P10809_1112
200.8
Naive CD8 T-cell nTPM: 260.2
Samples: 6
Max nTPM: 300.8
Min nTPM: 177.9
P10809_1016
300.8
P10809_1031
256.4
P10809_1050
255.7
P10809_1069
280.5
P10809_1087
289.8
P10809_1110
177.9
T-reg nTPM: 394.5
Samples: 6
Max nTPM: 425.9
Min nTPM: 340.4
P10809_1018
374.8
P10809_1037
425.9
P10809_1056
411.5
P10809_1075
414.5
P10809_1094
400.0
P10809_1106
340.4
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
29.1
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 20.3
Samples: 4
Max nTPM: 32.4
Min nTPM: 10.8
RHH5202_R3573
10.8
RHH5230_R3602
16.3
RHH5259_R3631
32.4
RHH5288_R3660
21.6
Effector memory CD8 T-cell nTPM: 24.2
Samples: 4
Max nTPM: 32.8
Min nTPM: 17.2
RHH5203_R3574
23.6
RHH5231_R3603
17.2
RHH5260_R3632
32.8
RHH5289_R3661
23.1
MAIT T-cell nTPM: 16.3
Samples: 4
Max nTPM: 23.0
Min nTPM: 10.6
RHH5233_R3605
13.4
RHH5205_R3576
23.0
RHH5262_R3634
18.0
RHH5297_R3663
10.6
Memory CD4 T-cell TFH nTPM: 15.8
Samples: 4
Max nTPM: 21.7
Min nTPM: 11.7
RHH5300_R3666
16.5
RHH5236_R3608
11.7
RHH5265_R3637
21.7
RHH5208_R3579
13.1
Memory CD4 T-cell Th1 nTPM: 25.7
Samples: 4
Max nTPM: 46.1
Min nTPM: 13.6
RHH5210_R3581
13.6
RHH5302_R3668
17.8
RHH5238_R3610
46.1
RHH5267_R3639
25.4
Memory CD4 T-cell Th1/Th17 nTPM: 19.4
Samples: 4
Max nTPM: 28.8
Min nTPM: 13.5
RHH5303_R3669
13.5
RHH5211_R3582
14.5
RHH5239_R3611
20.9
RHH5268_R3640
28.8
Memory CD4 T-cell Th17 nTPM: 20.8
Samples: 4
Max nTPM: 25.0
Min nTPM: 16.0
RHH5304_R3670
24.1
RHH5212_R3583
16.0
RHH5240_R3612
25.0
RHH5269_R3641
18.1
Memory CD4 T-cell Th2 nTPM: 19.8
Samples: 4
Max nTPM: 33.1
Min nTPM: 11.1
RHH5305_R3671
33.1
RHH5213_R3584
11.1
RHH5241_R3613
11.2
RHH5270_R3642
23.7
Naive CD4 T-cell nTPM: 25.8
Samples: 4
Max nTPM: 32.6
Min nTPM: 22.3
RHH5306_R3672
25.3
RHH5214_R3585
22.3
RHH5242_R3614
22.8
RHH5271_R3643
32.6
Naive CD8 T-cell nTPM: 21.9
Samples: 4
Max nTPM: 27.6
Min nTPM: 11.3
RHH5201_R3572
23.3
RHH5229_R3601
27.6
RHH5258_R3630
11.3
RHH5287_R3659
25.5
Non-Vd2 gdTCR nTPM: 20.8
Samples: 4
Max nTPM: 27.7
Min nTPM: 15.0
RHH5235_R3607
27.7
RHH5264_R3636
17.1
RHH5207_R3578
23.2
RHH5299_R3665
15.0
T-reg nTPM: 19.6
Samples: 4
Max nTPM: 27.3
Min nTPM: 12.3
RHH5301_R3667
14.2
RHH5237_R3609
12.3
RHH5266_R3638
24.6
RHH5209_R3580
27.3
Terminal effector memory CD4 T-cell nTPM: 21.2
Samples: 2
Max nTPM: 22.5
Min nTPM: 19.8
RHH5243_R3615
22.5
RHH5272_R3644
19.8
Terminal effector memory CD8 T-cell nTPM: 29.1
Samples: 4
Max nTPM: 39.2
Min nTPM: 18.9
RHH5232_R3604
28.8
RHH5204_R3575
29.5
RHH5261_R3633
39.2
RHH5296_R3662
18.9
Vd2 gdTCR nTPM: 27.1
Samples: 4
Max nTPM: 40.6
Min nTPM: 14.9
RHH5234_R3606
14.9
RHH5206_R3577
40.6
RHH5263_R3635
30.0
RHH5298_R3664
23.0
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
