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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
69.1
nTPM
Monaco:
109.8
nTPM
Schmiedel:
150.4
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
69.1
HPA sample
nTPM
gdT-cell nTPM: 48.2
Samples: 6
Max nTPM: 67.9
Min nTPM: 39.6
P10809_1007
40.4
P10809_1022
53.1
P10809_1041
67.9
P10809_1060
42.9
P10809_1077
39.6
P10809_1098
45.4
MAIT T-cell nTPM: 53.2
Samples: 6
Max nTPM: 61.6
Min nTPM: 42.6
P10809_1006
57.2
P10809_1024
56.8
P10809_1043
52.1
P10809_1062
61.6
P10809_1083
42.6
P10809_1097
48.7
Memory CD4 T-cell nTPM: 52.8
Samples: 6
Max nTPM: 60.1
Min nTPM: 45.0
P10809_1014
48.1
P10809_1026
58.2
P10809_1045
60.1
P10809_1064
45.0
P10809_1086
54.0
P10809_1113
51.2
Memory CD8 T-cell nTPM: 48.6
Samples: 5
Max nTPM: 60.2
Min nTPM: 38.8
P10809_1012
56.5
P10809_1027
38.8
P10809_1046
60.2
P10809_1065
43.3
P10809_1111
44.4
Naive CD4 T-cell nTPM: 61.8
Samples: 6
Max nTPM: 81.2
Min nTPM: 47.5
P10809_1015
47.5
P10809_1030
81.2
P10809_1049
69.3
P10809_1068
56.9
P10809_1085
54.1
P10809_1112
61.6
Naive CD8 T-cell nTPM: 50.4
Samples: 6
Max nTPM: 53.5
Min nTPM: 48.1
P10809_1016
49.1
P10809_1031
53.0
P10809_1050
48.6
P10809_1069
50.0
P10809_1087
48.1
P10809_1110
53.5
T-reg nTPM: 69.1
Samples: 6
Max nTPM: 87.1
Min nTPM: 45.9
P10809_1018
69.6
P10809_1037
45.9
P10809_1056
87.1
P10809_1075
58.8
P10809_1094
86.2
P10809_1106
66.8
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
109.8
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 81.2
Samples: 4
Max nTPM: 109.9
Min nTPM: 58.1
RHH5202_R3573
84.3
RHH5230_R3602
58.1
RHH5259_R3631
109.9
RHH5288_R3660
72.5
Effector memory CD8 T-cell nTPM: 91.2
Samples: 4
Max nTPM: 123.9
Min nTPM: 65.2
RHH5203_R3574
83.5
RHH5231_R3603
65.2
RHH5260_R3632
123.9
RHH5289_R3661
92.0
MAIT T-cell nTPM: 85.5
Samples: 4
Max nTPM: 96.1
Min nTPM: 74.8
RHH5233_R3605
76.1
RHH5205_R3576
96.1
RHH5262_R3634
94.8
RHH5297_R3663
74.8
Memory CD4 T-cell TFH nTPM: 91.9
Samples: 4
Max nTPM: 111.7
Min nTPM: 62.3
RHH5300_R3666
62.3
RHH5236_R3608
111.7
RHH5265_R3637
85.1
RHH5208_R3579
108.3
Memory CD4 T-cell Th1 nTPM: 79.4
Samples: 4
Max nTPM: 114.7
Min nTPM: 50.1
RHH5210_R3581
114.7
RHH5302_R3668
65.1
RHH5238_R3610
50.1
RHH5267_R3639
87.7
Memory CD4 T-cell Th1/Th17 nTPM: 91.9
Samples: 4
Max nTPM: 109.8
Min nTPM: 66.9
RHH5303_R3669
90.0
RHH5211_R3582
100.9
RHH5239_R3611
66.9
RHH5268_R3640
109.8
Memory CD4 T-cell Th17 nTPM: 98.7
Samples: 4
Max nTPM: 117.0
Min nTPM: 81.5
RHH5304_R3670
81.5
RHH5212_R3583
117.0
RHH5240_R3612
114.2
RHH5269_R3641
82.2
Memory CD4 T-cell Th2 nTPM: 84.8
Samples: 4
Max nTPM: 105.6
Min nTPM: 75.3
RHH5305_R3671
81.8
RHH5213_R3584
105.6
RHH5241_R3613
76.3
RHH5270_R3642
75.3
Naive CD4 T-cell nTPM: 107.1
Samples: 4
Max nTPM: 125.3
Min nTPM: 93.9
RHH5306_R3672
94.4
RHH5214_R3585
114.8
RHH5242_R3614
93.9
RHH5271_R3643
125.3
Naive CD8 T-cell nTPM: 89.3
Samples: 4
Max nTPM: 130.8
Min nTPM: 58.6
RHH5201_R3572
130.8
RHH5229_R3601
58.6
RHH5258_R3630
83.8
RHH5287_R3659
84.0
Non-Vd2 gdTCR nTPM: 80.6
Samples: 4
Max nTPM: 96.0
Min nTPM: 49.9
RHH5235_R3607
80.6
RHH5264_R3636
96.0
RHH5207_R3578
95.7
RHH5299_R3665
49.9
T-reg nTPM: 109.8
Samples: 4
Max nTPM: 120.6
Min nTPM: 84.3
RHH5301_R3667
84.3
RHH5237_R3609
120.5
RHH5266_R3638
113.6
RHH5209_R3580
120.6
Terminal effector memory CD4 T-cell nTPM: 80.2
Samples: 2
Max nTPM: 93.4
Min nTPM: 66.9
RHH5243_R3615
93.4
RHH5272_R3644
66.9
Terminal effector memory CD8 T-cell nTPM: 82.9
Samples: 4
Max nTPM: 119.6
Min nTPM: 59.0
RHH5232_R3604
77.0
RHH5204_R3575
76.1
RHH5261_R3633
119.6
RHH5296_R3662
59.0
Vd2 gdTCR nTPM: 82.3
Samples: 4
Max nTPM: 107.7
Min nTPM: 54.1
RHH5234_R3606
73.0
RHH5206_R3577
107.7
RHH5263_R3635
94.3
RHH5298_R3664
54.1
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
