HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: Medium
RNA expressioni
Consensus:18.3 nTPM
HPA Brain:9.5 nTPM
GTEx:18.3 nTPM
FANTOM5:32.2 Scaled Tags Per Million
Pig:16.5 nTPM
Mouse:32.6 nTPM
Allen mouse:4.6 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA035800
Glial cells Medium
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 9.5
Sample id Sample description nTPM
Hippocampus
nTPM: 9.5
2529 Female, age 94, left hemisphere 13.3
1855 Male, age 76, left hemisphere 11.9
1898 Male, age 80, left hemisphere 10.9
2621 Female, age 67, right hemisphere 7.9
1911 Female, age 85, right hemisphere 7.1
2148 Female, age 91, left hemisphere 6.1
Dentate gyrus
nTPM: 6.6
2530 Female, age 94, left hemisphere 9.2
2528 Male, age 74, both hemispheres 7.6
2010 Male, age 76, both hemispheres 7.4
2246 Female, age 85, both hemispheres 6.4
1927 Female, age 91, both hemispheres 5.5
2531 Female, age 67, both hemispheres 3.8
Entorhinal gyrus
nTPM: 7.8
2117 Female, age 91, right hemisphere 10.3
2686 Male, age 75, right hemisphere 8.9
2764 Male, age 80, right hemisphere 8.0
1938 Female, age 85, left hemisphere 7.8
1787 Male, age 76, left hemisphere 7.2
2613 Female, age 94, left hemisphere 4.7
Hippocampus, CA1
nTPM: 7.2
2749 Male, age 80, left hemisphere 8.5
2527 Male, age 74, both hemispheres 7.4
1873 Female, age 85, both hemispheres 7.2
2045 Male, age 76, both hemispheres 6.8
2082 Female, age 91, right hemisphere 6.0
Hippocampus, CA2
nTPM: 7.7
1892 Male, age 76, both hemispheres 10.3
2249 Male, age 74, both hemispheres 9.5
1963 Male, age 80, left hemisphere 8.1
1940 Female, age 85, left hemisphere 7.5
2113 Female, age 91, right hemisphere 6.0
2437 Female, age 94, left hemisphere 5.0
Hippocampus, CA3
nTPM: 6.6
1867 Male, age 76, both hemispheres 11.4
1891 Female, age 85, both hemispheres 7.9
2436 Male, age 74, both hemispheres 6.6
2137 Male, age 80, left hemisphere 5.6
2620 Female, age 94, left hemisphere 4.7
2861 Female, age 67, both hemispheres 3.2
Parahippocampal cortex
nTPM: 6.5
1850 Male, age 80, both hemispheres 8.3
1933 Female, age 85, both hemispheres 7.8
2018 Male, age 76, both hemispheres 7.8
2532 Female, age 72, left hemisphere 7.2
1990 Female, age 91, right hemisphere 6.7
2692 Male, age 74, both hemispheres 6.3
2245 Female, age 91, both hemispheres 6.2
2693 Female, age 94, both hemispheres 5.6
2250 Female, age 67, right hemisphere 4.7
2622 Female, age 67, right hemisphere 4.4
Perirhinal gyrus
nTPM: 5.8
1847 Female, age 91, left hemisphere 6.8
1794 Male, age 80, right hemisphere 6.4
2848 Male, age 76, right hemisphere 6.1
1841 Female, age 85, right hemisphere 5.9
2521 Female, age 94, right hemisphere 4.0
Subiculum
nTPM: 8.3
1977 Female, age 85, both hemispheres 9.8
2042 Male, age 76, both hemispheres 9.4
2438 Female, age 94, left hemisphere 9.1
1901 Male, age 80, both hemispheres 8.2
2729 Female, age 91, right hemisphere 6.8
2619 Male, age 74, both hemispheres 6.2

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 18.3
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 18.3
Samples: 197

Max nTPM: 34.9
Min nTPM: 6.8
Std nTPM: 5.3
Median nTPM: 17.7
GTEX-1LB8K-0011-R1b-SM-EZ6MV 50-59 years, male 34.9
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 32.2
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 32.0
GTEX-13S7M-0011-R1b-SM-5PNZE 60-69 years, female 31.3
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 30.9
GTEX-13OVL-0011-R1a-SM-5L3H5 50-59 years, male 29.5
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 29.5
GTEX-17EVP-0011-R1a-SM-7DHLA 40-49 years, male 29.3
GTEX-QMR6-0011-R1A-SM-32PKW 50-59 years, male 28.7
GTEX-13JUV-0011-R1a-SM-5LZY4 40-49 years, female 27.3
GTEX-1H3O1-0011-R1b-SM-CL554 60-69 years, male 26.9
Show allShow less

HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 32.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 32.2
FF:10169-103B7 60 years, female 34.2
FF:10153-102I9 76 years, female 30.2

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 16.5
Pig sample Sample description nTPM
Subiculum
nTPM: 11.5
Samples: 4

Max nTPM: 14.0
Min nTPM: 10.2
Sample A Female 14.0
Sample B Female 11.0
Sample C Male 10.2
Sample D Male 10.7
Dorsal hippocampus
nTPM: 16.6
Samples: 4

Max nTPM: 21.6
Min nTPM: 12.7
Sample A Female 21.6
Sample B Female 15.1
Sample C Male 16.8
Sample D Male 12.7
Entorhinal cortex
nTPM: 11.0
Samples: 4

Max nTPM: 11.9
Min nTPM: 9.1
Sample A Female 11.8
Sample B Female 11.9
Sample C Male 11.1
Sample D Male 9.1
Ventral hippocampus
nTPM: 13.2
Samples: 4

Max nTPM: 14.2
Min nTPM: 12.6
Sample A Female 14.2
Sample B Female 12.6
Sample C Male 12.8
Sample D Male 13.0

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 32.6
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 30.6
Samples: 4

Max nTPM: 32.0
Min nTPM: 29.6
Sample A Male 30.2
Sample B Male 29.6
Sample C Female 30.7
Sample D Female 32.0
Hippocampal formation
nTPM: 32.7
Samples: 4

Max nTPM: 34.6
Min nTPM: 30.6
Sample A Male 33.8
Sample B Male 31.6
Sample C Female 34.6
Sample D Female 30.6

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 4.6
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 4.6
413793 Antisense, RP_040809_01_E03, Mouse strain C57BL/6J (56 days, male) 4.6

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.


contact@proteinatlas.org