HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:32.1 nTPM
HPA Brain:17.6 nTPM
GTEx:32.1 nTPM
FANTOM5:45.3 Scaled Tags Per Million
Pig:17.7 nTPM
Mouse:36.2 nTPM
Allen mouse:1.9 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA035206Antibody HPA035207
Glial cells Not detectedNot detected
Neuronal cells Not detectedLow





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 17.6
Sample id Sample description nTPM
Hippocampus
nTPM: 15.8
1898 Male, age 80, left hemisphere 22.7
2621 Female, age 67, right hemisphere 18.7
2529 Female, age 94, left hemisphere 17.0
1911 Female, age 85, right hemisphere 13.8
1855 Male, age 76, left hemisphere 12.1
2148 Female, age 91, left hemisphere 10.2
Dentate gyrus
nTPM: 13.3
2528 Male, age 74, both hemispheres 14.4
2530 Female, age 94, left hemisphere 13.5
1927 Female, age 91, both hemispheres 13.4
2010 Male, age 76, both hemispheres 13.4
2246 Female, age 85, both hemispheres 12.9
2531 Female, age 67, both hemispheres 12.2
Entorhinal gyrus
nTPM: 17.6
2764 Male, age 80, right hemisphere 24.5
2613 Female, age 94, left hemisphere 19.0
1787 Male, age 76, left hemisphere 18.6
2117 Female, age 91, right hemisphere 14.7
2686 Male, age 75, right hemisphere 14.5
1938 Female, age 85, left hemisphere 14.4
Hippocampus, CA1
nTPM: 14.5
1873 Female, age 85, both hemispheres 15.8
2749 Male, age 80, left hemisphere 14.9
2527 Male, age 74, both hemispheres 14.6
2045 Male, age 76, both hemispheres 13.7
2082 Female, age 91, right hemisphere 13.2
Hippocampus, CA2
nTPM: 14.3
1892 Male, age 76, both hemispheres 19.0
2437 Female, age 94, left hemisphere 15.7
1940 Female, age 85, left hemisphere 14.2
2113 Female, age 91, right hemisphere 13.9
1963 Male, age 80, left hemisphere 12.0
2249 Male, age 74, both hemispheres 10.8
Hippocampus, CA3
nTPM: 15.3
1867 Male, age 76, both hemispheres 20.3
2436 Male, age 74, both hemispheres 17.6
1891 Female, age 85, both hemispheres 15.9
2137 Male, age 80, left hemisphere 12.8
2620 Female, age 94, left hemisphere 12.7
2861 Female, age 67, both hemispheres 12.7
Parahippocampal cortex
nTPM: 15.2
1990 Female, age 91, right hemisphere 17.8
2532 Female, age 72, left hemisphere 17.0
2245 Female, age 91, both hemispheres 16.9
1850 Male, age 80, both hemispheres 16.5
2692 Male, age 74, both hemispheres 16.4
2250 Female, age 67, right hemisphere 15.6
1933 Female, age 85, both hemispheres 13.7
2018 Male, age 76, both hemispheres 13.3
2622 Female, age 67, right hemisphere 13.3
2693 Female, age 94, both hemispheres 11.9
Perirhinal gyrus
nTPM: 17.0
1794 Male, age 80, right hemisphere 20.9
1847 Female, age 91, left hemisphere 20.0
2848 Male, age 76, right hemisphere 16.1
2521 Female, age 94, right hemisphere 14.4
1841 Female, age 85, right hemisphere 13.8
Subiculum
nTPM: 15.7
2438 Female, age 94, left hemisphere 18.7
2619 Male, age 74, both hemispheres 17.4
1901 Male, age 80, both hemispheres 15.9
2729 Female, age 91, right hemisphere 15.8
1977 Female, age 85, both hemispheres 14.7
2042 Male, age 76, both hemispheres 11.8

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 32.1
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 32.1
Samples: 197

Max nTPM: 83.3
Min nTPM: 19.3
Std nTPM: 7.3
Median nTPM: 31.5
GTEX-X4EP-0011-R1A-SM-3P624 60-69 years, female 83.3
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 56.0
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 54.4
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 51.5
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 48.5
GTEX-1HR98-0011-R1a-SM-ARZLQ 60-69 years, male 48.2
GTEX-131YS-0011-R1a-SM-5DUXC 60-69 years, female 46.2
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 45.0
GTEX-17F97-0011-R1b-SM-7IGM9 50-59 years, male 44.6
GTEX-1ICLZ-0011-R1b-SM-A9SM3 60-69 years, male 42.9
GTEX-183WM-0011-R1a-SM-718A8 70-79 years, female 42.4
Show allShow less

HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 45.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 45.3
FF:10153-102I9 76 years, female 52.2
FF:10169-103B7 60 years, female 38.4

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 17.7
Pig sample Sample description nTPM
Subiculum
nTPM: 17.7
Samples: 4

Max nTPM: 18.5
Min nTPM: 16.1
Sample A Female 18.5
Sample B Female 18.4
Sample C Male 17.9
Sample D Male 16.1
Dorsal hippocampus
nTPM: 16.2
Samples: 4

Max nTPM: 18.0
Min nTPM: 14.7
Sample A Female 18.0
Sample B Female 16.0
Sample C Male 16.2
Sample D Male 14.7
Entorhinal cortex
nTPM: 15.4
Samples: 4

Max nTPM: 16.3
Min nTPM: 14.5
Sample A Female 16.3
Sample B Female 14.8
Sample C Male 15.9
Sample D Male 14.5
Ventral hippocampus
nTPM: 17.3
Samples: 4

Max nTPM: 19.3
Min nTPM: 14.4
Sample A Female 18.3
Sample B Female 17.1
Sample C Male 19.3
Sample D Male 14.4

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 36.2
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 36.2
Samples: 4

Max nTPM: 40.8
Min nTPM: 32.0
Sample A Male 32.0
Sample B Male 36.8
Sample C Female 35.2
Sample D Female 40.8
Hippocampal formation
nTPM: 34.2
Samples: 4

Max nTPM: 41.5
Min nTPM: 28.8
Sample A Male 41.5
Sample B Male 34.5
Sample C Female 28.8
Sample D Female 31.9

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 1.9
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 1.9
69080025 Antisense, RP_050324_01_E03, Mouse strain C57BL/6J (56 days, male) 1.9

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.


contact@proteinatlas.org