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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
18.9
nTPM
Monaco:
13.4
nTPM
Schmiedel:
7.5
TPM
T-CELLS - Annotated protein expression
Pending normal tissue analysis
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
18.9
HPA sample
nTPM
gdT-cell nTPM: 17.3
Samples: 6
Max nTPM: 31.7
Min nTPM: 10.0
P10809_1007
14.7
P10809_1022
10.0
P10809_1041
31.7
P10809_1060
16.3
P10809_1077
10.6
P10809_1098
20.2
MAIT T-cell nTPM: 15.6
Samples: 6
Max nTPM: 22.8
Min nTPM: 8.8
P10809_1006
11.7
P10809_1024
17.7
P10809_1043
22.8
P10809_1062
15.9
P10809_1083
8.8
P10809_1097
16.5
Memory CD4 T-cell nTPM: 17.2
Samples: 6
Max nTPM: 25.0
Min nTPM: 11.9
P10809_1014
13.6
P10809_1026
25.0
P10809_1045
20.5
P10809_1064
11.9
P10809_1086
17.0
P10809_1113
15.3
Memory CD8 T-cell nTPM: 14.6
Samples: 5
Max nTPM: 20.2
Min nTPM: 7.3
P10809_1012
7.3
P10809_1027
14.9
P10809_1046
19.0
P10809_1065
11.6
P10809_1111
20.2
Naive CD4 T-cell nTPM: 18.6
Samples: 6
Max nTPM: 26.4
Min nTPM: 8.9
P10809_1015
8.9
P10809_1030
17.7
P10809_1049
26.4
P10809_1068
23.4
P10809_1085
17.3
P10809_1112
17.8
Naive CD8 T-cell nTPM: 14.6
Samples: 6
Max nTPM: 20.5
Min nTPM: 8.8
P10809_1016
8.8
P10809_1031
12.1
P10809_1050
13.0
P10809_1069
20.5
P10809_1087
17.6
P10809_1110
15.7
T-reg nTPM: 18.9
Samples: 6
Max nTPM: 33.4
Min nTPM: 10.7
P10809_1018
13.8
P10809_1037
33.4
P10809_1056
17.8
P10809_1075
10.7
P10809_1094
11.4
P10809_1106
26.2
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
13.4
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 11.2
Samples: 4
Max nTPM: 14.9
Min nTPM: 8.5
RHH5202_R3573
8.5
RHH5230_R3602
10.7
RHH5259_R3631
14.9
RHH5288_R3660
10.7
Effector memory CD8 T-cell nTPM: 8.3
Samples: 4
Max nTPM: 10.5
Min nTPM: 6.3
RHH5203_R3574
6.3
RHH5231_R3603
7.7
RHH5260_R3632
8.8
RHH5289_R3661
10.5
MAIT T-cell nTPM: 9.6
Samples: 4
Max nTPM: 14.0
Min nTPM: 4.3
RHH5233_R3605
4.3
RHH5205_R3576
8.4
RHH5262_R3634
11.8
RHH5297_R3663
14.0
Memory CD4 T-cell TFH nTPM: 11.6
Samples: 4
Max nTPM: 18.5
Min nTPM: 6.7
RHH5300_R3666
6.7
RHH5236_R3608
10.8
RHH5265_R3637
10.4
RHH5208_R3579
18.5
Memory CD4 T-cell Th1 nTPM: 8.6
Samples: 4
Max nTPM: 10.9
Min nTPM: 5.6
RHH5210_R3581
8.1
RHH5302_R3668
10.9
RHH5238_R3610
5.6
RHH5267_R3639
9.8
Memory CD4 T-cell Th1/Th17 nTPM: 9.5
Samples: 4
Max nTPM: 17.5
Min nTPM: 3.3
RHH5303_R3669
11.1
RHH5211_R3582
3.3
RHH5239_R3611
5.9
RHH5268_R3640
17.5
Memory CD4 T-cell Th17 nTPM: 9.6
Samples: 4
Max nTPM: 13.5
Min nTPM: 5.2
RHH5304_R3670
9.0
RHH5212_R3583
5.2
RHH5240_R3612
13.5
RHH5269_R3641
10.7
Memory CD4 T-cell Th2 nTPM: 13.4
Samples: 4
Max nTPM: 16.6
Min nTPM: 11.0
RHH5305_R3671
12.8
RHH5213_R3584
13.0
RHH5241_R3613
16.6
RHH5270_R3642
11.0
Naive CD4 T-cell nTPM: 10.9
Samples: 4
Max nTPM: 12.5
Min nTPM: 9.8
RHH5306_R3672
9.8
RHH5214_R3585
9.9
RHH5242_R3614
11.5
RHH5271_R3643
12.5
Naive CD8 T-cell nTPM: 11.0
Samples: 4
Max nTPM: 14.2
Min nTPM: 7.8
RHH5201_R3572
11.4
RHH5229_R3601
7.8
RHH5258_R3630
14.2
RHH5287_R3659
10.4
Non-Vd2 gdTCR nTPM: 7.4
Samples: 4
Max nTPM: 13.3
Min nTPM: 3.7
RHH5235_R3607
3.7
RHH5264_R3636
13.3
RHH5207_R3578
6.1
RHH5299_R3665
6.3
T-reg nTPM: 10.7
Samples: 4
Max nTPM: 11.9
Min nTPM: 9.2
RHH5301_R3667
11.1
RHH5237_R3609
10.6
RHH5266_R3638
11.9
RHH5209_R3580
9.2
Terminal effector memory CD4 T-cell nTPM: 6.2
Samples: 2
Max nTPM: 6.3
Min nTPM: 6.0
RHH5243_R3615
6.0
RHH5272_R3644
6.3
Terminal effector memory CD8 T-cell nTPM: 8.8
Samples: 4
Max nTPM: 14.1
Min nTPM: 4.8
RHH5232_R3604
14.1
RHH5204_R3575
4.8
RHH5261_R3633
9.3
RHH5296_R3662
6.8
Vd2 gdTCR nTPM: 8.5
Samples: 4
Max nTPM: 11.5
Min nTPM: 4.6
RHH5234_R3606
8.5
RHH5206_R3577
4.6
RHH5263_R3635
9.3
RHH5298_R3664
11.5
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
