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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
236.4
nTPM
Monaco:
104.3
nTPM
Schmiedel:
173.1
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
236.4
HPA sample
nTPM
gdT-cell nTPM: 127.6
Samples: 6
Max nTPM: 137.8
Min nTPM: 108.4
P10809_1007
108.4
P10809_1022
137.8
P10809_1041
117.2
P10809_1060
129.5
P10809_1077
136.3
P10809_1098
136.1
MAIT T-cell nTPM: 149.7
Samples: 6
Max nTPM: 217.4
Min nTPM: 94.9
P10809_1006
94.9
P10809_1024
217.4
P10809_1043
135.7
P10809_1062
127.3
P10809_1083
145.5
P10809_1097
177.2
Memory CD4 T-cell nTPM: 156.7
Samples: 6
Max nTPM: 169.9
Min nTPM: 134.4
P10809_1014
134.4
P10809_1026
168.8
P10809_1045
141.5
P10809_1064
156.8
P10809_1086
168.8
P10809_1113
169.9
Memory CD8 T-cell nTPM: 148.5
Samples: 5
Max nTPM: 175.5
Min nTPM: 121.2
P10809_1012
121.2
P10809_1027
166.1
P10809_1046
138.0
P10809_1065
141.6
P10809_1111
175.5
Naive CD4 T-cell nTPM: 168.8
Samples: 6
Max nTPM: 203.2
Min nTPM: 125.8
P10809_1015
125.8
P10809_1030
203.2
P10809_1049
195.5
P10809_1068
159.3
P10809_1085
149.0
P10809_1112
180.2
Naive CD8 T-cell nTPM: 154.4
Samples: 6
Max nTPM: 169.0
Min nTPM: 138.2
P10809_1016
138.2
P10809_1031
169.0
P10809_1050
150.3
P10809_1069
151.2
P10809_1087
165.8
P10809_1110
151.9
T-reg nTPM: 236.4
Samples: 6
Max nTPM: 266.7
Min nTPM: 154.9
P10809_1018
154.9
P10809_1037
250.4
P10809_1056
266.7
P10809_1075
257.9
P10809_1094
231.7
P10809_1106
256.7
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
104.3
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 67.7
Samples: 4
Max nTPM: 96.9
Min nTPM: 30.7
RHH5202_R3573
81.2
RHH5230_R3602
30.7
RHH5259_R3631
62.0
RHH5288_R3660
96.9
Effector memory CD8 T-cell nTPM: 51.2
Samples: 4
Max nTPM: 61.4
Min nTPM: 33.3
RHH5203_R3574
61.4
RHH5231_R3603
33.3
RHH5260_R3632
59.4
RHH5289_R3661
50.7
MAIT T-cell nTPM: 62.2
Samples: 4
Max nTPM: 92.2
Min nTPM: 42.7
RHH5233_R3605
42.7
RHH5205_R3576
63.6
RHH5262_R3634
50.1
RHH5297_R3663
92.2
Memory CD4 T-cell TFH nTPM: 83.6
Samples: 4
Max nTPM: 129.6
Min nTPM: 50.1
RHH5300_R3666
92.0
RHH5236_R3608
129.6
RHH5265_R3637
50.1
RHH5208_R3579
62.5
Memory CD4 T-cell Th1 nTPM: 83.8
Samples: 4
Max nTPM: 126.0
Min nTPM: 54.2
RHH5210_R3581
76.4
RHH5302_R3668
126.0
RHH5238_R3610
54.2
RHH5267_R3639
78.5
Memory CD4 T-cell Th1/Th17 nTPM: 68.1
Samples: 4
Max nTPM: 102.6
Min nTPM: 36.3
RHH5303_R3669
102.6
RHH5211_R3582
66.2
RHH5239_R3611
36.3
RHH5268_R3640
67.3
Memory CD4 T-cell Th17 nTPM: 61.8
Samples: 4
Max nTPM: 82.0
Min nTPM: 41.5
RHH5304_R3670
82.0
RHH5212_R3583
73.2
RHH5240_R3612
41.5
RHH5269_R3641
50.4
Memory CD4 T-cell Th2 nTPM: 63.0
Samples: 4
Max nTPM: 94.5
Min nTPM: 44.9
RHH5305_R3671
94.5
RHH5213_R3584
61.4
RHH5241_R3613
51.3
RHH5270_R3642
44.9
Naive CD4 T-cell nTPM: 66.4
Samples: 4
Max nTPM: 105.5
Min nTPM: 30.8
RHH5306_R3672
73.3
RHH5214_R3585
105.5
RHH5242_R3614
30.8
RHH5271_R3643
55.9
Naive CD8 T-cell nTPM: 58.0
Samples: 4
Max nTPM: 63.9
Min nTPM: 47.8
RHH5201_R3572
62.5
RHH5229_R3601
47.8
RHH5258_R3630
63.9
RHH5287_R3659
57.6
Non-Vd2 gdTCR nTPM: 66.8
Samples: 4
Max nTPM: 81.0
Min nTPM: 41.4
RHH5235_R3607
41.4
RHH5264_R3636
65.3
RHH5207_R3578
81.0
RHH5299_R3665
79.4
T-reg nTPM: 87.0
Samples: 4
Max nTPM: 121.4
Min nTPM: 62.5
RHH5301_R3667
121.4
RHH5237_R3609
71.3
RHH5266_R3638
62.5
RHH5209_R3580
92.9
Terminal effector memory CD4 T-cell nTPM: 47.5
Samples: 2
Max nTPM: 63.0
Min nTPM: 31.9
RHH5243_R3615
31.9
RHH5272_R3644
63.0
Terminal effector memory CD8 T-cell nTPM: 104.3
Samples: 4
Max nTPM: 220.2
Min nTPM: 43.5
RHH5232_R3604
43.5
RHH5204_R3575
220.2
RHH5261_R3633
73.3
RHH5296_R3662
80.0
Vd2 gdTCR nTPM: 94.9
Samples: 4
Max nTPM: 183.8
Min nTPM: 34.3
RHH5234_R3606
34.3
RHH5206_R3577
183.8
RHH5263_R3635
65.4
RHH5298_R3664
95.9
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
