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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
56.3
nTPM
Monaco:
128.3
nTPM
Schmiedel:
67.5
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
56.3
HPA sample
nTPM
gdT-cell nTPM: 51.7
Samples: 6
Max nTPM: 70.7
Min nTPM: 34.3
P10809_1007
34.3
P10809_1022
48.8
P10809_1041
39.9
P10809_1060
69.1
P10809_1077
70.7
P10809_1098
47.4
MAIT T-cell nTPM: 25.7
Samples: 6
Max nTPM: 31.8
Min nTPM: 20.2
P10809_1006
22.2
P10809_1024
31.8
P10809_1043
20.2
P10809_1062
28.3
P10809_1083
24.5
P10809_1097
27.3
Memory CD4 T-cell nTPM: 29.1
Samples: 6
Max nTPM: 52.2
Min nTPM: 18.3
P10809_1014
21.3
P10809_1026
23.3
P10809_1045
18.3
P10809_1064
41.2
P10809_1086
52.2
P10809_1113
18.5
Memory CD8 T-cell nTPM: 35.6
Samples: 5
Max nTPM: 62.9
Min nTPM: 18.6
P10809_1012
27.4
P10809_1027
41.3
P10809_1046
27.7
P10809_1065
62.9
P10809_1111
18.6
Naive CD4 T-cell nTPM: 33.9
Samples: 6
Max nTPM: 45.2
Min nTPM: 22.1
P10809_1015
22.1
P10809_1030
28.6
P10809_1049
25.9
P10809_1068
45.2
P10809_1085
44.7
P10809_1112
36.8
Naive CD8 T-cell nTPM: 56.3
Samples: 6
Max nTPM: 85.1
Min nTPM: 34.8
P10809_1016
34.8
P10809_1031
53.3
P10809_1050
47.6
P10809_1069
59.7
P10809_1087
85.1
P10809_1110
57.3
T-reg nTPM: 5.0
Samples: 6
Max nTPM: 15.9
Min nTPM: 1.2
P10809_1018
1.2
P10809_1037
2.8
P10809_1056
15.9
P10809_1075
3.6
P10809_1094
4.5
P10809_1106
2.2
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
128.3
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 51.9
Samples: 4
Max nTPM: 61.9
Min nTPM: 38.4
RHH5202_R3573
61.9
RHH5230_R3602
49.3
RHH5259_R3631
38.4
RHH5288_R3660
57.9
Effector memory CD8 T-cell nTPM: 50.2
Samples: 4
Max nTPM: 105.1
Min nTPM: 18.4
RHH5203_R3574
22.9
RHH5231_R3603
54.3
RHH5260_R3632
18.4
RHH5289_R3661
105.1
MAIT T-cell nTPM: 58.8
Samples: 4
Max nTPM: 80.4
Min nTPM: 22.2
RHH5233_R3605
55.1
RHH5205_R3576
22.2
RHH5262_R3634
80.4
RHH5297_R3663
77.6
Memory CD4 T-cell TFH nTPM: 55.6
Samples: 4
Max nTPM: 81.4
Min nTPM: 30.7
RHH5300_R3666
65.6
RHH5236_R3608
30.7
RHH5265_R3637
44.7
RHH5208_R3579
81.4
Memory CD4 T-cell Th1 nTPM: 58.2
Samples: 4
Max nTPM: 92.5
Min nTPM: 27.3
RHH5210_R3581
92.5
RHH5302_R3668
76.9
RHH5238_R3610
36.0
RHH5267_R3639
27.3
Memory CD4 T-cell Th1/Th17 nTPM: 36.4
Samples: 4
Max nTPM: 65.8
Min nTPM: 21.2
RHH5303_R3669
65.8
RHH5211_R3582
21.2
RHH5239_R3611
23.2
RHH5268_R3640
35.2
Memory CD4 T-cell Th17 nTPM: 35.4
Samples: 4
Max nTPM: 53.6
Min nTPM: 17.1
RHH5304_R3670
53.6
RHH5212_R3583
48.4
RHH5240_R3612
22.4
RHH5269_R3641
17.1
Memory CD4 T-cell Th2 nTPM: 35.8
Samples: 4
Max nTPM: 52.2
Min nTPM: 11.8
RHH5305_R3671
51.3
RHH5213_R3584
52.2
RHH5241_R3613
27.9
RHH5270_R3642
11.8
Naive CD4 T-cell nTPM: 63.2
Samples: 4
Max nTPM: 87.0
Min nTPM: 35.6
RHH5306_R3672
87.0
RHH5214_R3585
84.5
RHH5242_R3614
45.8
RHH5271_R3643
35.6
Naive CD8 T-cell nTPM: 110.0
Samples: 4
Max nTPM: 153.5
Min nTPM: 77.6
RHH5201_R3572
153.5
RHH5229_R3601
77.6
RHH5258_R3630
91.0
RHH5287_R3659
117.7
Non-Vd2 gdTCR nTPM: 117.6
Samples: 4
Max nTPM: 203.6
Min nTPM: 82.0
RHH5235_R3607
82.0
RHH5264_R3636
94.4
RHH5207_R3578
90.4
RHH5299_R3665
203.6
T-reg nTPM: 50.9
Samples: 4
Max nTPM: 80.8
Min nTPM: 31.6
RHH5301_R3667
55.6
RHH5237_R3609
35.6
RHH5266_R3638
31.6
RHH5209_R3580
80.8
Terminal effector memory CD4 T-cell nTPM: 79.0
Samples: 2
Max nTPM: 114.2
Min nTPM: 43.8
RHH5243_R3615
114.2
RHH5272_R3644
43.8
Terminal effector memory CD8 T-cell nTPM: 128.3
Samples: 4
Max nTPM: 159.1
Min nTPM: 59.1
RHH5232_R3604
156.5
RHH5204_R3575
159.1
RHH5261_R3633
59.1
RHH5296_R3662
138.3
Vd2 gdTCR nTPM: 85.1
Samples: 4
Max nTPM: 130.6
Min nTPM: 35.2
RHH5234_R3606
73.6
RHH5206_R3577
100.9
RHH5263_R3635
35.2
RHH5298_R3664
130.6
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
