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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
65.0
nTPM
Monaco:
187.3
nTPM
Schmiedel:
141.6
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
65.0
HPA sample
nTPM
gdT-cell nTPM: 61.6
Samples: 6
Max nTPM: 80.7
Min nTPM: 42.6
P10809_1007
42.6
P10809_1022
80.3
P10809_1041
80.7
P10809_1060
51.4
P10809_1077
50.3
P10809_1098
64.4
MAIT T-cell nTPM: 51.3
Samples: 6
Max nTPM: 62.8
Min nTPM: 43.6
P10809_1006
46.2
P10809_1024
62.8
P10809_1043
55.4
P10809_1062
51.0
P10809_1083
43.6
P10809_1097
48.8
Memory CD4 T-cell nTPM: 50.4
Samples: 6
Max nTPM: 58.4
Min nTPM: 40.0
P10809_1014
48.5
P10809_1026
58.4
P10809_1045
56.5
P10809_1064
40.0
P10809_1086
49.8
P10809_1113
49.3
Memory CD8 T-cell nTPM: 55.1
Samples: 5
Max nTPM: 73.5
Min nTPM: 46.0
P10809_1012
57.5
P10809_1027
46.0
P10809_1046
73.5
P10809_1065
51.1
P10809_1111
47.5
Naive CD4 T-cell nTPM: 65.0
Samples: 6
Max nTPM: 73.8
Min nTPM: 58.3
P10809_1015
60.1
P10809_1030
66.0
P10809_1049
58.3
P10809_1068
73.8
P10809_1085
64.1
P10809_1112
67.8
Naive CD8 T-cell nTPM: 51.8
Samples: 6
Max nTPM: 60.0
Min nTPM: 32.2
P10809_1016
58.4
P10809_1031
32.2
P10809_1050
59.2
P10809_1069
50.3
P10809_1087
50.4
P10809_1110
60.0
T-reg nTPM: 59.4
Samples: 6
Max nTPM: 72.4
Min nTPM: 45.1
P10809_1018
62.5
P10809_1037
72.4
P10809_1056
60.6
P10809_1075
45.1
P10809_1094
64.0
P10809_1106
51.8
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
187.3
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 133.8
Samples: 4
Max nTPM: 152.7
Min nTPM: 111.7
RHH5202_R3573
124.0
RHH5230_R3602
146.7
RHH5259_R3631
111.7
RHH5288_R3660
152.7
Effector memory CD8 T-cell nTPM: 187.3
Samples: 4
Max nTPM: 228.0
Min nTPM: 161.4
RHH5203_R3574
189.5
RHH5231_R3603
161.4
RHH5260_R3632
170.4
RHH5289_R3661
228.0
MAIT T-cell nTPM: 145.8
Samples: 4
Max nTPM: 152.4
Min nTPM: 135.0
RHH5233_R3605
143.7
RHH5205_R3576
135.0
RHH5262_R3634
152.2
RHH5297_R3663
152.4
Memory CD4 T-cell TFH nTPM: 138.6
Samples: 4
Max nTPM: 151.1
Min nTPM: 123.5
RHH5300_R3666
151.1
RHH5236_R3608
140.7
RHH5265_R3637
123.5
RHH5208_R3579
139.2
Memory CD4 T-cell Th1 nTPM: 137.5
Samples: 4
Max nTPM: 161.7
Min nTPM: 111.0
RHH5210_R3581
127.4
RHH5302_R3668
161.7
RHH5238_R3610
111.0
RHH5267_R3639
150.0
Memory CD4 T-cell Th1/Th17 nTPM: 132.6
Samples: 4
Max nTPM: 171.9
Min nTPM: 102.2
RHH5303_R3669
171.9
RHH5211_R3582
138.4
RHH5239_R3611
102.2
RHH5268_R3640
117.7
Memory CD4 T-cell Th17 nTPM: 132.6
Samples: 4
Max nTPM: 167.2
Min nTPM: 103.0
RHH5304_R3670
167.2
RHH5212_R3583
103.0
RHH5240_R3612
132.5
RHH5269_R3641
127.6
Memory CD4 T-cell Th2 nTPM: 155.5
Samples: 4
Max nTPM: 179.2
Min nTPM: 139.9
RHH5305_R3671
179.2
RHH5213_R3584
139.9
RHH5241_R3613
143.8
RHH5270_R3642
159.0
Naive CD4 T-cell nTPM: 172.9
Samples: 4
Max nTPM: 198.2
Min nTPM: 145.1
RHH5306_R3672
198.2
RHH5214_R3585
158.9
RHH5242_R3614
145.1
RHH5271_R3643
189.5
Naive CD8 T-cell nTPM: 165.2
Samples: 4
Max nTPM: 206.1
Min nTPM: 111.6
RHH5201_R3572
206.1
RHH5229_R3601
111.6
RHH5258_R3630
140.7
RHH5287_R3659
202.2
Non-Vd2 gdTCR nTPM: 174.4
Samples: 4
Max nTPM: 183.5
Min nTPM: 164.0
RHH5235_R3607
182.9
RHH5264_R3636
183.5
RHH5207_R3578
164.0
RHH5299_R3665
167.3
T-reg nTPM: 168.0
Samples: 4
Max nTPM: 178.3
Min nTPM: 157.7
RHH5301_R3667
165.1
RHH5237_R3609
171.0
RHH5266_R3638
178.3
RHH5209_R3580
157.7
Terminal effector memory CD4 T-cell nTPM: 161.9
Samples: 2
Max nTPM: 184.1
Min nTPM: 139.7
RHH5243_R3615
139.7
RHH5272_R3644
184.1
Terminal effector memory CD8 T-cell nTPM: 165.0
Samples: 4
Max nTPM: 171.2
Min nTPM: 151.0
RHH5232_R3604
171.2
RHH5204_R3575
151.0
RHH5261_R3633
169.7
RHH5296_R3662
168.0
Vd2 gdTCR nTPM: 154.6
Samples: 4
Max nTPM: 204.1
Min nTPM: 133.9
RHH5234_R3606
133.9
RHH5206_R3577
142.5
RHH5263_R3635
204.1
RHH5298_R3664
137.8
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
