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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
158.7
nTPM
Monaco:
66.8
nTPM
Schmiedel:
98.6
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
158.7
HPA sample
nTPM
gdT-cell nTPM: 129.3
Samples: 6
Max nTPM: 193.1
Min nTPM: 85.1
P10809_1007
85.1
P10809_1022
133.9
P10809_1041
193.1
P10809_1060
125.0
P10809_1077
129.5
P10809_1098
108.9
MAIT T-cell nTPM: 118.9
Samples: 6
Max nTPM: 161.7
Min nTPM: 77.6
P10809_1006
77.6
P10809_1024
161.7
P10809_1043
115.3
P10809_1062
121.6
P10809_1083
115.4
P10809_1097
121.7
Memory CD4 T-cell nTPM: 116.6
Samples: 6
Max nTPM: 146.0
Min nTPM: 75.2
P10809_1014
75.2
P10809_1026
121.7
P10809_1045
146.0
P10809_1064
123.3
P10809_1086
124.8
P10809_1113
108.8
Memory CD8 T-cell nTPM: 126.8
Samples: 5
Max nTPM: 156.8
Min nTPM: 82.7
P10809_1012
82.7
P10809_1027
147.0
P10809_1046
156.8
P10809_1065
123.8
P10809_1111
123.7
Naive CD4 T-cell nTPM: 116.0
Samples: 6
Max nTPM: 162.4
Min nTPM: 60.5
P10809_1015
60.5
P10809_1030
126.2
P10809_1049
162.4
P10809_1068
111.4
P10809_1085
118.6
P10809_1112
116.8
Naive CD8 T-cell nTPM: 123.1
Samples: 6
Max nTPM: 151.5
Min nTPM: 75.9
P10809_1016
75.9
P10809_1031
144.6
P10809_1050
151.5
P10809_1069
127.7
P10809_1087
126.4
P10809_1110
112.6
T-reg nTPM: 158.7
Samples: 6
Max nTPM: 195.3
Min nTPM: 93.7
P10809_1018
93.7
P10809_1037
192.1
P10809_1056
195.3
P10809_1075
160.1
P10809_1094
146.6
P10809_1106
164.4
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
66.8
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 46.4
Samples: 4
Max nTPM: 78.5
Min nTPM: 26.4
RHH5202_R3573
37.9
RHH5230_R3602
26.4
RHH5259_R3631
42.7
RHH5288_R3660
78.5
Effector memory CD8 T-cell nTPM: 39.4
Samples: 4
Max nTPM: 45.5
Min nTPM: 27.7
RHH5203_R3574
40.4
RHH5231_R3603
43.9
RHH5260_R3632
45.5
RHH5289_R3661
27.7
MAIT T-cell nTPM: 44.8
Samples: 4
Max nTPM: 57.2
Min nTPM: 35.7
RHH5233_R3605
45.5
RHH5205_R3576
35.7
RHH5262_R3634
40.7
RHH5297_R3663
57.2
Memory CD4 T-cell TFH nTPM: 49.9
Samples: 4
Max nTPM: 77.3
Min nTPM: 31.5
RHH5300_R3666
57.7
RHH5236_R3608
77.3
RHH5265_R3637
31.5
RHH5208_R3579
32.9
Memory CD4 T-cell Th1 nTPM: 52.0
Samples: 4
Max nTPM: 71.6
Min nTPM: 44.7
RHH5210_R3581
46.7
RHH5302_R3668
71.6
RHH5238_R3610
44.8
RHH5267_R3639
44.7
Memory CD4 T-cell Th1/Th17 nTPM: 46.3
Samples: 4
Max nTPM: 80.8
Min nTPM: 28.1
RHH5303_R3669
80.8
RHH5211_R3582
33.4
RHH5239_R3611
28.1
RHH5268_R3640
42.9
Memory CD4 T-cell Th17 nTPM: 29.3
Samples: 4
Max nTPM: 33.9
Min nTPM: 24.0
RHH5304_R3670
33.9
RHH5212_R3583
32.8
RHH5240_R3612
26.4
RHH5269_R3641
24.0
Memory CD4 T-cell Th2 nTPM: 41.0
Samples: 4
Max nTPM: 55.9
Min nTPM: 29.8
RHH5305_R3671
55.9
RHH5213_R3584
31.9
RHH5241_R3613
46.5
RHH5270_R3642
29.8
Naive CD4 T-cell nTPM: 40.2
Samples: 4
Max nTPM: 62.5
Min nTPM: 25.7
RHH5306_R3672
43.1
RHH5214_R3585
62.5
RHH5242_R3614
29.3
RHH5271_R3643
25.7
Naive CD8 T-cell nTPM: 36.4
Samples: 4
Max nTPM: 44.3
Min nTPM: 27.5
RHH5201_R3572
34.2
RHH5229_R3601
27.5
RHH5258_R3630
44.3
RHH5287_R3659
39.7
Non-Vd2 gdTCR nTPM: 60.5
Samples: 4
Max nTPM: 93.2
Min nTPM: 39.8
RHH5235_R3607
39.8
RHH5264_R3636
64.7
RHH5207_R3578
44.1
RHH5299_R3665
93.2
T-reg nTPM: 48.2
Samples: 4
Max nTPM: 68.3
Min nTPM: 31.4
RHH5301_R3667
68.3
RHH5237_R3609
49.4
RHH5266_R3638
31.4
RHH5209_R3580
43.5
Terminal effector memory CD4 T-cell nTPM: 30.2
Samples: 2
Max nTPM: 38.4
Min nTPM: 21.9
RHH5243_R3615
21.9
RHH5272_R3644
38.4
Terminal effector memory CD8 T-cell nTPM: 60.2
Samples: 4
Max nTPM: 107.4
Min nTPM: 32.5
RHH5232_R3604
32.5
RHH5204_R3575
107.4
RHH5261_R3633
41.9
RHH5296_R3662
59.1
Vd2 gdTCR nTPM: 66.8
Samples: 4
Max nTPM: 102.7
Min nTPM: 32.2
RHH5234_R3606
42.6
RHH5206_R3577
102.7
RHH5263_R3635
32.2
RHH5298_R3664
89.8
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
