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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
48.1
nTPM
Monaco:
152.9
nTPM
Schmiedel:
116.0
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
48.1
HPA sample
nTPM
gdT-cell nTPM: 35.6
Samples: 6
Max nTPM: 39.8
Min nTPM: 32.1
P10809_1007
33.9
P10809_1022
34.8
P10809_1041
33.7
P10809_1060
32.1
P10809_1077
39.8
P10809_1098
39.5
MAIT T-cell nTPM: 48.1
Samples: 6
Max nTPM: 59.7
Min nTPM: 31.3
P10809_1006
59.7
P10809_1024
52.0
P10809_1043
31.3
P10809_1062
52.3
P10809_1083
49.6
P10809_1097
43.6
Memory CD4 T-cell nTPM: 35.4
Samples: 6
Max nTPM: 45.0
Min nTPM: 26.1
P10809_1014
39.3
P10809_1026
26.1
P10809_1045
30.7
P10809_1064
36.9
P10809_1086
45.0
P10809_1113
34.5
Memory CD8 T-cell nTPM: 36.7
Samples: 5
Max nTPM: 40.6
Min nTPM: 25.9
P10809_1012
38.7
P10809_1027
40.6
P10809_1046
25.9
P10809_1065
39.9
P10809_1111
38.5
Naive CD4 T-cell nTPM: 32.8
Samples: 6
Max nTPM: 44.5
Min nTPM: 22.1
P10809_1015
44.5
P10809_1030
22.1
P10809_1049
24.9
P10809_1068
35.5
P10809_1085
34.9
P10809_1112
35.1
Naive CD8 T-cell nTPM: 35.0
Samples: 6
Max nTPM: 51.4
Min nTPM: 21.7
P10809_1016
37.4
P10809_1031
21.7
P10809_1050
27.1
P10809_1069
42.0
P10809_1087
51.4
P10809_1110
30.2
T-reg nTPM: 34.2
Samples: 6
Max nTPM: 41.6
Min nTPM: 24.4
P10809_1018
34.6
P10809_1037
31.7
P10809_1056
24.4
P10809_1075
34.5
P10809_1094
41.6
P10809_1106
38.4
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
152.9
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 100.6
Samples: 4
Max nTPM: 128.5
Min nTPM: 71.8
RHH5202_R3573
107.5
RHH5230_R3602
128.5
RHH5259_R3631
94.4
RHH5288_R3660
71.8
Effector memory CD8 T-cell nTPM: 130.5
Samples: 4
Max nTPM: 176.8
Min nTPM: 91.2
RHH5203_R3574
143.9
RHH5231_R3603
110.1
RHH5260_R3632
91.2
RHH5289_R3661
176.8
MAIT T-cell nTPM: 152.9
Samples: 4
Max nTPM: 202.9
Min nTPM: 113.8
RHH5233_R3605
154.3
RHH5205_R3576
202.9
RHH5262_R3634
140.6
RHH5297_R3663
113.8
Memory CD4 T-cell TFH nTPM: 88.8
Samples: 4
Max nTPM: 106.2
Min nTPM: 77.2
RHH5300_R3666
81.5
RHH5236_R3608
106.2
RHH5265_R3637
77.2
RHH5208_R3579
90.3
Memory CD4 T-cell Th1 nTPM: 90.7
Samples: 4
Max nTPM: 111.3
Min nTPM: 76.8
RHH5210_R3581
85.7
RHH5302_R3668
89.0
RHH5238_R3610
76.8
RHH5267_R3639
111.3
Memory CD4 T-cell Th1/Th17 nTPM: 121.6
Samples: 4
Max nTPM: 140.5
Min nTPM: 109.5
RHH5303_R3669
114.1
RHH5211_R3582
140.5
RHH5239_R3611
109.5
RHH5268_R3640
122.1
Memory CD4 T-cell Th17 nTPM: 102.3
Samples: 4
Max nTPM: 122.7
Min nTPM: 86.5
RHH5304_R3670
122.7
RHH5212_R3583
86.5
RHH5240_R3612
111.4
RHH5269_R3641
88.6
Memory CD4 T-cell Th2 nTPM: 90.1
Samples: 4
Max nTPM: 95.1
Min nTPM: 86.8
RHH5305_R3671
86.8
RHH5213_R3584
95.1
RHH5241_R3613
91.2
RHH5270_R3642
87.4
Naive CD4 T-cell nTPM: 90.5
Samples: 4
Max nTPM: 104.6
Min nTPM: 79.5
RHH5306_R3672
79.5
RHH5214_R3585
104.6
RHH5242_R3614
88.1
RHH5271_R3643
89.9
Naive CD8 T-cell nTPM: 85.1
Samples: 4
Max nTPM: 98.6
Min nTPM: 63.6
RHH5201_R3572
96.1
RHH5229_R3601
63.6
RHH5258_R3630
98.6
RHH5287_R3659
82.2
Non-Vd2 gdTCR nTPM: 118.7
Samples: 4
Max nTPM: 135.1
Min nTPM: 96.8
RHH5235_R3607
135.1
RHH5264_R3636
110.8
RHH5207_R3578
132.0
RHH5299_R3665
96.8
T-reg nTPM: 81.0
Samples: 4
Max nTPM: 86.0
Min nTPM: 77.6
RHH5301_R3667
77.6
RHH5237_R3609
78.5
RHH5266_R3638
86.0
RHH5209_R3580
82.0
Terminal effector memory CD4 T-cell nTPM: 136.9
Samples: 2
Max nTPM: 149.1
Min nTPM: 124.6
RHH5243_R3615
149.1
RHH5272_R3644
124.6
Terminal effector memory CD8 T-cell nTPM: 119.9
Samples: 4
Max nTPM: 144.6
Min nTPM: 100.7
RHH5232_R3604
144.6
RHH5204_R3575
110.0
RHH5261_R3633
124.2
RHH5296_R3662
100.7
Vd2 gdTCR nTPM: 117.1
Samples: 4
Max nTPM: 131.1
Min nTPM: 92.3
RHH5234_R3606
128.4
RHH5206_R3577
116.6
RHH5263_R3635
131.1
RHH5298_R3664
92.3
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
