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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
109.7
nTPM
Monaco:
254.2
nTPM
Schmiedel:
50.0
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
109.7
HPA sample
nTPM
gdT-cell nTPM: 83.0
Samples: 6
Max nTPM: 99.4
Min nTPM: 67.3
P10809_1007
67.3
P10809_1022
99.4
P10809_1041
79.6
P10809_1060
75.1
P10809_1077
95.8
P10809_1098
80.9
MAIT T-cell nTPM: 105.7
Samples: 6
Max nTPM: 134.5
Min nTPM: 75.3
P10809_1006
104.4
P10809_1024
134.5
P10809_1043
99.3
P10809_1062
101.2
P10809_1083
75.3
P10809_1097
119.6
Memory CD4 T-cell nTPM: 91.9
Samples: 6
Max nTPM: 118.6
Min nTPM: 78.3
P10809_1014
79.4
P10809_1026
78.3
P10809_1045
89.6
P10809_1064
94.5
P10809_1086
118.6
P10809_1113
91.0
Memory CD8 T-cell nTPM: 93.9
Samples: 5
Max nTPM: 100.9
Min nTPM: 87.4
P10809_1012
87.4
P10809_1027
92.0
P10809_1046
91.2
P10809_1065
100.9
P10809_1111
98.0
Naive CD4 T-cell nTPM: 86.5
Samples: 6
Max nTPM: 110.0
Min nTPM: 72.3
P10809_1015
72.3
P10809_1030
73.6
P10809_1049
91.2
P10809_1068
91.6
P10809_1085
110.0
P10809_1112
80.3
Naive CD8 T-cell nTPM: 87.2
Samples: 6
Max nTPM: 116.6
Min nTPM: 58.7
P10809_1016
58.7
P10809_1031
79.5
P10809_1050
85.7
P10809_1069
103.1
P10809_1087
116.6
P10809_1110
79.3
T-reg nTPM: 109.7
Samples: 6
Max nTPM: 136.8
Min nTPM: 84.8
P10809_1018
84.8
P10809_1037
117.7
P10809_1056
107.8
P10809_1075
119.0
P10809_1094
136.8
P10809_1106
91.9
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
254.2
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 210.4
Samples: 4
Max nTPM: 237.7
Min nTPM: 190.5
RHH5202_R3573
195.2
RHH5230_R3602
237.7
RHH5259_R3631
218.3
RHH5288_R3660
190.5
Effector memory CD8 T-cell nTPM: 234.2
Samples: 4
Max nTPM: 284.1
Min nTPM: 202.0
RHH5203_R3574
246.5
RHH5231_R3603
202.0
RHH5260_R3632
204.3
RHH5289_R3661
284.1
MAIT T-cell nTPM: 248.0
Samples: 4
Max nTPM: 287.8
Min nTPM: 189.1
RHH5233_R3605
287.8
RHH5205_R3576
276.9
RHH5262_R3634
238.3
RHH5297_R3663
189.1
Memory CD4 T-cell TFH nTPM: 208.2
Samples: 4
Max nTPM: 227.3
Min nTPM: 187.0
RHH5300_R3666
187.0
RHH5236_R3608
216.2
RHH5265_R3637
202.4
RHH5208_R3579
227.3
Memory CD4 T-cell Th1 nTPM: 186.1
Samples: 4
Max nTPM: 208.3
Min nTPM: 172.1
RHH5210_R3581
176.6
RHH5302_R3668
172.1
RHH5238_R3610
208.3
RHH5267_R3639
187.5
Memory CD4 T-cell Th1/Th17 nTPM: 242.3
Samples: 4
Max nTPM: 254.3
Min nTPM: 228.3
RHH5303_R3669
228.3
RHH5211_R3582
251.7
RHH5239_R3611
254.3
RHH5268_R3640
234.7
Memory CD4 T-cell Th17 nTPM: 230.5
Samples: 4
Max nTPM: 258.2
Min nTPM: 196.1
RHH5304_R3670
223.5
RHH5212_R3583
244.2
RHH5240_R3612
258.2
RHH5269_R3641
196.1
Memory CD4 T-cell Th2 nTPM: 248.0
Samples: 4
Max nTPM: 299.2
Min nTPM: 200.1
RHH5305_R3671
200.1
RHH5213_R3584
263.5
RHH5241_R3613
299.2
RHH5270_R3642
229.3
Naive CD4 T-cell nTPM: 193.7
Samples: 4
Max nTPM: 218.4
Min nTPM: 179.5
RHH5306_R3672
185.9
RHH5214_R3585
179.5
RHH5242_R3614
218.4
RHH5271_R3643
190.9
Naive CD8 T-cell nTPM: 198.8
Samples: 4
Max nTPM: 218.0
Min nTPM: 171.0
RHH5201_R3572
217.5
RHH5229_R3601
218.0
RHH5258_R3630
188.7
RHH5287_R3659
171.0
Non-Vd2 gdTCR nTPM: 217.8
Samples: 4
Max nTPM: 284.5
Min nTPM: 155.3
RHH5235_R3607
284.5
RHH5264_R3636
198.4
RHH5207_R3578
233.1
RHH5299_R3665
155.3
T-reg nTPM: 211.8
Samples: 4
Max nTPM: 273.9
Min nTPM: 160.4
RHH5301_R3667
160.4
RHH5237_R3609
273.9
RHH5266_R3638
220.3
RHH5209_R3580
192.7
Terminal effector memory CD4 T-cell nTPM: 254.2
Samples: 2
Max nTPM: 278.3
Min nTPM: 230.1
RHH5243_R3615
278.3
RHH5272_R3644
230.1
Terminal effector memory CD8 T-cell nTPM: 221.0
Samples: 4
Max nTPM: 264.8
Min nTPM: 166.7
RHH5232_R3604
264.8
RHH5204_R3575
166.7
RHH5261_R3633
226.1
RHH5296_R3662
226.2
Vd2 gdTCR nTPM: 208.5
Samples: 4
Max nTPM: 230.7
Min nTPM: 153.0
RHH5234_R3606
225.8
RHH5206_R3577
230.7
RHH5263_R3635
224.4
RHH5298_R3664
153.0
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
