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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
83.4
nTPM
Monaco:
192.1
nTPM
Schmiedel:
199.0
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
83.4
HPA sample
nTPM
gdT-cell nTPM: 69.9
Samples: 6
Max nTPM: 85.6
Min nTPM: 52.6
P10809_1007
56.7
P10809_1022
67.9
P10809_1041
52.6
P10809_1060
78.4
P10809_1077
85.6
P10809_1098
77.9
MAIT T-cell nTPM: 83.4
Samples: 6
Max nTPM: 109.0
Min nTPM: 58.3
P10809_1006
74.6
P10809_1024
73.8
P10809_1043
58.3
P10809_1062
101.4
P10809_1083
109.0
P10809_1097
83.2
Memory CD4 T-cell nTPM: 72.8
Samples: 6
Max nTPM: 97.1
Min nTPM: 39.1
P10809_1014
69.9
P10809_1026
56.7
P10809_1045
39.1
P10809_1064
97.1
P10809_1086
94.0
P10809_1113
80.0
Memory CD8 T-cell nTPM: 78.0
Samples: 5
Max nTPM: 118.3
Min nTPM: 37.6
P10809_1012
70.5
P10809_1027
81.4
P10809_1046
37.6
P10809_1065
82.2
P10809_1111
118.3
Naive CD4 T-cell nTPM: 55.8
Samples: 6
Max nTPM: 74.3
Min nTPM: 36.6
P10809_1015
74.3
P10809_1030
39.6
P10809_1049
36.6
P10809_1068
67.1
P10809_1085
61.7
P10809_1112
55.5
Naive CD8 T-cell nTPM: 55.9
Samples: 6
Max nTPM: 95.0
Min nTPM: 28.2
P10809_1016
39.2
P10809_1031
41.7
P10809_1050
28.2
P10809_1069
58.5
P10809_1087
95.0
P10809_1110
72.9
T-reg nTPM: 75.5
Samples: 6
Max nTPM: 98.2
Min nTPM: 37.7
P10809_1018
77.7
P10809_1037
81.6
P10809_1056
63.3
P10809_1075
94.5
P10809_1094
37.7
P10809_1106
98.2
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
192.1
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 130.2
Samples: 4
Max nTPM: 147.9
Min nTPM: 112.7
RHH5202_R3573
138.8
RHH5230_R3602
121.5
RHH5259_R3631
147.9
RHH5288_R3660
112.7
Effector memory CD8 T-cell nTPM: 192.2
Samples: 4
Max nTPM: 219.7
Min nTPM: 155.6
RHH5203_R3574
155.6
RHH5231_R3603
190.5
RHH5260_R3632
219.7
RHH5289_R3661
202.8
MAIT T-cell nTPM: 131.7
Samples: 4
Max nTPM: 163.5
Min nTPM: 105.2
RHH5233_R3605
109.8
RHH5205_R3576
163.5
RHH5262_R3634
148.1
RHH5297_R3663
105.2
Memory CD4 T-cell TFH nTPM: 136.6
Samples: 4
Max nTPM: 179.9
Min nTPM: 83.3
RHH5300_R3666
83.3
RHH5236_R3608
165.9
RHH5265_R3637
117.1
RHH5208_R3579
179.9
Memory CD4 T-cell Th1 nTPM: 127.2
Samples: 4
Max nTPM: 165.0
Min nTPM: 96.4
RHH5210_R3581
108.8
RHH5302_R3668
96.4
RHH5238_R3610
165.0
RHH5267_R3639
138.7
Memory CD4 T-cell Th1/Th17 nTPM: 154.4
Samples: 4
Max nTPM: 184.3
Min nTPM: 126.9
RHH5303_R3669
137.2
RHH5211_R3582
184.3
RHH5239_R3611
169.3
RHH5268_R3640
126.9
Memory CD4 T-cell Th17 nTPM: 174.0
Samples: 4
Max nTPM: 254.4
Min nTPM: 135.5
RHH5304_R3670
144.6
RHH5212_R3583
135.5
RHH5240_R3612
254.4
RHH5269_R3641
161.6
Memory CD4 T-cell Th2 nTPM: 144.0
Samples: 4
Max nTPM: 167.4
Min nTPM: 130.3
RHH5305_R3671
131.6
RHH5213_R3584
167.4
RHH5241_R3613
146.5
RHH5270_R3642
130.3
Naive CD4 T-cell nTPM: 90.2
Samples: 4
Max nTPM: 101.3
Min nTPM: 72.6
RHH5306_R3672
72.6
RHH5214_R3585
92.1
RHH5242_R3614
101.3
RHH5271_R3643
94.7
Naive CD8 T-cell nTPM: 88.7
Samples: 4
Max nTPM: 125.1
Min nTPM: 68.9
RHH5201_R3572
85.8
RHH5229_R3601
125.1
RHH5258_R3630
68.9
RHH5287_R3659
74.8
Non-Vd2 gdTCR nTPM: 149.6
Samples: 4
Max nTPM: 198.6
Min nTPM: 100.2
RHH5235_R3607
110.6
RHH5264_R3636
188.9
RHH5207_R3578
198.6
RHH5299_R3665
100.2
T-reg nTPM: 114.5
Samples: 4
Max nTPM: 153.8
Min nTPM: 93.5
RHH5301_R3667
93.5
RHH5237_R3609
153.8
RHH5266_R3638
101.3
RHH5209_R3580
109.4
Terminal effector memory CD4 T-cell nTPM: 140.3
Samples: 2
Max nTPM: 143.5
Min nTPM: 137.1
RHH5243_R3615
143.5
RHH5272_R3644
137.1
Terminal effector memory CD8 T-cell nTPM: 149.0
Samples: 4
Max nTPM: 202.1
Min nTPM: 121.3
RHH5232_R3604
142.3
RHH5204_R3575
121.3
RHH5261_R3633
202.1
RHH5296_R3662
130.2
Vd2 gdTCR nTPM: 147.1
Samples: 4
Max nTPM: 201.7
Min nTPM: 89.5
RHH5234_R3606
104.3
RHH5206_R3577
201.7
RHH5263_R3635
192.9
RHH5298_R3664
89.5
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
