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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
12.9
nTPM
Monaco:
99.4
nTPM
Schmiedel:
94.9
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
12.9
HPA sample
nTPM
gdT-cell nTPM: 1.5
Samples: 6
Max nTPM: 1.9
Min nTPM: 1.0
P10809_1007
1.2
P10809_1022
1.3
P10809_1041
1.0
P10809_1060
1.8
P10809_1077
1.7
P10809_1098
1.9
MAIT T-cell nTPM: 12.9
Samples: 6
Max nTPM: 18.6
Min nTPM: 9.2
P10809_1006
18.6
P10809_1024
9.2
P10809_1043
9.7
P10809_1062
14.2
P10809_1083
12.8
P10809_1097
12.9
Memory CD4 T-cell nTPM: 3.5
Samples: 6
Max nTPM: 4.2
Min nTPM: 2.9
P10809_1014
4.0
P10809_1026
3.5
P10809_1045
4.2
P10809_1064
2.9
P10809_1086
3.2
P10809_1113
3.3
Memory CD8 T-cell nTPM: 4.0
Samples: 5
Max nTPM: 6.3
Min nTPM: 1.8
P10809_1012
6.3
P10809_1027
1.8
P10809_1046
3.0
P10809_1065
6.2
P10809_1111
2.9
Naive CD4 T-cell nTPM: 0.6
Samples: 6
Max nTPM: 1.3
Min nTPM: 0.1
P10809_1015
0.7
P10809_1030
1.3
P10809_1049
0.1
P10809_1068
0.9
P10809_1085
0.3
P10809_1112
0.2
Naive CD8 T-cell nTPM: 1.8
Samples: 6
Max nTPM: 3.6
Min nTPM: 0.5
P10809_1016
2.8
P10809_1031
1.6
P10809_1050
1.4
P10809_1069
3.6
P10809_1087
0.5
P10809_1110
1.1
T-reg nTPM: 3.2
Samples: 6
Max nTPM: 6.4
Min nTPM: 1.6
P10809_1018
3.1
P10809_1037
3.0
P10809_1056
1.6
P10809_1075
6.4
P10809_1094
2.7
P10809_1106
2.6
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
99.4
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 27.2
Samples: 4
Max nTPM: 33.7
Min nTPM: 20.9
RHH5202_R3573
21.6
RHH5230_R3602
33.7
RHH5259_R3631
32.4
RHH5288_R3660
20.9
Effector memory CD8 T-cell nTPM: 27.9
Samples: 4
Max nTPM: 42.2
Min nTPM: 18.0
RHH5203_R3574
30.1
RHH5231_R3603
18.0
RHH5260_R3632
21.2
RHH5289_R3661
42.2
MAIT T-cell nTPM: 99.4
Samples: 4
Max nTPM: 133.2
Min nTPM: 71.0
RHH5233_R3605
71.0
RHH5205_R3576
133.2
RHH5262_R3634
90.9
RHH5297_R3663
102.5
Memory CD4 T-cell TFH nTPM: 22.9
Samples: 4
Max nTPM: 32.8
Min nTPM: 11.7
RHH5300_R3666
32.8
RHH5236_R3608
28.2
RHH5265_R3637
11.7
RHH5208_R3579
19.0
Memory CD4 T-cell Th1 nTPM: 20.5
Samples: 4
Max nTPM: 25.0
Min nTPM: 17.1
RHH5210_R3581
17.2
RHH5302_R3668
22.7
RHH5238_R3610
17.1
RHH5267_R3639
25.0
Memory CD4 T-cell Th1/Th17 nTPM: 57.2
Samples: 4
Max nTPM: 68.4
Min nTPM: 43.9
RHH5303_R3669
49.1
RHH5211_R3582
68.4
RHH5239_R3611
67.2
RHH5268_R3640
43.9
Memory CD4 T-cell Th17 nTPM: 69.3
Samples: 4
Max nTPM: 75.8
Min nTPM: 57.7
RHH5304_R3670
74.0
RHH5212_R3583
69.6
RHH5240_R3612
57.7
RHH5269_R3641
75.8
Memory CD4 T-cell Th2 nTPM: 41.7
Samples: 4
Max nTPM: 70.5
Min nTPM: 20.7
RHH5305_R3671
39.3
RHH5213_R3584
70.5
RHH5241_R3613
20.7
RHH5270_R3642
36.2
Naive CD4 T-cell nTPM: 9.1
Samples: 4
Max nTPM: 14.4
Min nTPM: 2.6
RHH5306_R3672
10.8
RHH5214_R3585
8.6
RHH5242_R3614
14.4
RHH5271_R3643
2.6
Naive CD8 T-cell nTPM: 25.1
Samples: 4
Max nTPM: 43.6
Min nTPM: 11.3
RHH5201_R3572
21.1
RHH5229_R3601
43.6
RHH5258_R3630
11.3
RHH5287_R3659
24.5
Non-Vd2 gdTCR nTPM: 10.2
Samples: 4
Max nTPM: 19.9
Min nTPM: 1.6
RHH5235_R3607
13.2
RHH5264_R3636
1.6
RHH5207_R3578
5.9
RHH5299_R3665
19.9
T-reg nTPM: 25.7
Samples: 4
Max nTPM: 30.2
Min nTPM: 18.0
RHH5301_R3667
26.0
RHH5237_R3609
28.4
RHH5266_R3638
18.0
RHH5209_R3580
30.2
Terminal effector memory CD4 T-cell nTPM: 43.0
Samples: 2
Max nTPM: 75.3
Min nTPM: 10.6
RHH5243_R3615
75.3
RHH5272_R3644
10.6
Terminal effector memory CD8 T-cell nTPM: 17.7
Samples: 4
Max nTPM: 24.6
Min nTPM: 8.6
RHH5232_R3604
16.4
RHH5204_R3575
8.6
RHH5261_R3633
21.0
RHH5296_R3662
24.6
Vd2 gdTCR nTPM: 28.6
Samples: 4
Max nTPM: 40.2
Min nTPM: 17.1
RHH5234_R3606
28.8
RHH5206_R3577
40.2
RHH5263_R3635
17.1
RHH5298_R3664
28.4
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
