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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
89.4
nTPM
Monaco:
235.1
nTPM
Schmiedel:
171.6
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
89.4
HPA sample
nTPM
gdT-cell nTPM: 75.2
Samples: 6
Max nTPM: 105.6
Min nTPM: 34.1
P10809_1007
81.1
P10809_1022
66.0
P10809_1041
105.6
P10809_1060
34.1
P10809_1077
95.9
P10809_1098
68.3
MAIT T-cell nTPM: 55.3
Samples: 6
Max nTPM: 73.9
Min nTPM: 30.2
P10809_1006
46.5
P10809_1024
30.2
P10809_1043
73.9
P10809_1062
47.6
P10809_1083
70.3
P10809_1097
63.5
Memory CD4 T-cell nTPM: 89.4
Samples: 6
Max nTPM: 138.6
Min nTPM: 40.1
P10809_1014
73.3
P10809_1026
138.6
P10809_1045
103.3
P10809_1064
127.0
P10809_1086
54.1
P10809_1113
40.1
Memory CD8 T-cell nTPM: 77.5
Samples: 5
Max nTPM: 96.7
Min nTPM: 60.0
P10809_1012
60.0
P10809_1027
74.2
P10809_1046
96.7
P10809_1065
90.8
P10809_1111
65.9
Naive CD4 T-cell nTPM: 46.3
Samples: 6
Max nTPM: 65.2
Min nTPM: 34.8
P10809_1015
35.0
P10809_1030
45.1
P10809_1049
65.2
P10809_1068
45.4
P10809_1085
52.0
P10809_1112
34.8
Naive CD8 T-cell nTPM: 52.5
Samples: 6
Max nTPM: 86.2
Min nTPM: 32.3
P10809_1016
36.7
P10809_1031
52.9
P10809_1050
59.7
P10809_1069
86.2
P10809_1087
32.3
P10809_1110
47.0
T-reg nTPM: 77.2
Samples: 6
Max nTPM: 118.9
Min nTPM: 42.5
P10809_1018
48.8
P10809_1037
73.0
P10809_1056
118.9
P10809_1075
101.3
P10809_1094
42.5
P10809_1106
78.6
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
235.1
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 146.2
Samples: 4
Max nTPM: 187.3
Min nTPM: 112.0
RHH5202_R3573
117.1
RHH5230_R3602
187.3
RHH5259_R3631
168.5
RHH5288_R3660
112.0
Effector memory CD8 T-cell nTPM: 214.0
Samples: 4
Max nTPM: 281.2
Min nTPM: 139.4
RHH5203_R3574
164.6
RHH5231_R3603
281.2
RHH5260_R3632
270.9
RHH5289_R3661
139.4
MAIT T-cell nTPM: 131.4
Samples: 4
Max nTPM: 149.8
Min nTPM: 116.8
RHH5233_R3605
116.8
RHH5205_R3576
149.8
RHH5262_R3634
140.3
RHH5297_R3663
118.7
Memory CD4 T-cell TFH nTPM: 187.9
Samples: 4
Max nTPM: 270.9
Min nTPM: 127.5
RHH5300_R3666
200.9
RHH5236_R3608
270.9
RHH5265_R3637
152.2
RHH5208_R3579
127.5
Memory CD4 T-cell Th1 nTPM: 161.5
Samples: 4
Max nTPM: 189.6
Min nTPM: 138.2
RHH5210_R3581
138.2
RHH5302_R3668
151.3
RHH5238_R3610
166.8
RHH5267_R3639
189.6
Memory CD4 T-cell Th1/Th17 nTPM: 181.3
Samples: 4
Max nTPM: 248.4
Min nTPM: 101.5
RHH5303_R3669
101.5
RHH5211_R3582
248.4
RHH5239_R3611
172.3
RHH5268_R3640
203.0
Memory CD4 T-cell Th17 nTPM: 226.7
Samples: 4
Max nTPM: 299.5
Min nTPM: 141.0
RHH5304_R3670
141.0
RHH5212_R3583
299.5
RHH5240_R3612
207.2
RHH5269_R3641
259.0
Memory CD4 T-cell Th2 nTPM: 235.1
Samples: 4
Max nTPM: 304.7
Min nTPM: 138.0
RHH5305_R3671
244.1
RHH5213_R3584
304.7
RHH5241_R3613
138.0
RHH5270_R3642
253.5
Naive CD4 T-cell nTPM: 125.5
Samples: 4
Max nTPM: 139.3
Min nTPM: 106.2
RHH5306_R3672
138.3
RHH5214_R3585
139.3
RHH5242_R3614
106.2
RHH5271_R3643
118.1
Naive CD8 T-cell nTPM: 111.8
Samples: 4
Max nTPM: 159.7
Min nTPM: 65.3
RHH5201_R3572
65.3
RHH5229_R3601
159.7
RHH5258_R3630
111.8
RHH5287_R3659
110.2
Non-Vd2 gdTCR nTPM: 177.6
Samples: 4
Max nTPM: 231.5
Min nTPM: 113.1
RHH5235_R3607
231.5
RHH5264_R3636
158.2
RHH5207_R3578
113.1
RHH5299_R3665
207.7
T-reg nTPM: 175.9
Samples: 4
Max nTPM: 213.4
Min nTPM: 156.4
RHH5301_R3667
177.0
RHH5237_R3609
213.4
RHH5266_R3638
156.4
RHH5209_R3580
156.7
Terminal effector memory CD4 T-cell nTPM: 198.0
Samples: 2
Max nTPM: 236.0
Min nTPM: 159.9
RHH5243_R3615
236.0
RHH5272_R3644
159.9
Terminal effector memory CD8 T-cell nTPM: 209.3
Samples: 4
Max nTPM: 328.4
Min nTPM: 122.5
RHH5232_R3604
199.0
RHH5204_R3575
187.3
RHH5261_R3633
328.4
RHH5296_R3662
122.5
Vd2 gdTCR nTPM: 200.0
Samples: 4
Max nTPM: 229.3
Min nTPM: 173.4
RHH5234_R3606
191.3
RHH5206_R3577
206.1
RHH5263_R3635
229.3
RHH5298_R3664
173.4
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
