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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
79.0
nTPM
Monaco:
55.1
nTPM
Schmiedel:
48.4
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
79.0
HPA sample
nTPM
gdT-cell nTPM: 49.2
Samples: 6
Max nTPM: 56.4
Min nTPM: 36.8
P10809_1007
36.8
P10809_1022
56.4
P10809_1041
51.2
P10809_1060
48.8
P10809_1077
53.7
P10809_1098
48.0
MAIT T-cell nTPM: 51.1
Samples: 6
Max nTPM: 65.9
Min nTPM: 29.8
P10809_1006
29.8
P10809_1024
54.6
P10809_1043
61.3
P10809_1062
54.6
P10809_1083
65.9
P10809_1097
40.3
Memory CD4 T-cell nTPM: 48.3
Samples: 6
Max nTPM: 60.2
Min nTPM: 25.0
P10809_1014
25.0
P10809_1026
60.2
P10809_1045
53.4
P10809_1064
55.1
P10809_1086
52.8
P10809_1113
43.3
Memory CD8 T-cell nTPM: 56.8
Samples: 5
Max nTPM: 72.7
Min nTPM: 41.5
P10809_1012
41.5
P10809_1027
72.7
P10809_1046
58.8
P10809_1065
65.6
P10809_1111
45.6
Naive CD4 T-cell nTPM: 34.4
Samples: 6
Max nTPM: 44.6
Min nTPM: 20.7
P10809_1015
20.7
P10809_1030
42.0
P10809_1049
44.6
P10809_1068
29.1
P10809_1085
37.7
P10809_1112
32.1
Naive CD8 T-cell nTPM: 47.0
Samples: 6
Max nTPM: 66.9
Min nTPM: 22.3
P10809_1016
22.3
P10809_1031
47.1
P10809_1050
55.7
P10809_1069
66.9
P10809_1087
55.9
P10809_1110
33.8
T-reg nTPM: 79.0
Samples: 6
Max nTPM: 130.9
Min nTPM: 40.9
P10809_1018
40.9
P10809_1037
74.2
P10809_1056
130.9
P10809_1075
80.1
P10809_1094
83.4
P10809_1106
64.3
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
55.1
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 27.8
Samples: 4
Max nTPM: 36.8
Min nTPM: 24.3
RHH5202_R3573
24.3
RHH5230_R3602
25.0
RHH5259_R3631
25.1
RHH5288_R3660
36.8
Effector memory CD8 T-cell nTPM: 39.7
Samples: 4
Max nTPM: 47.5
Min nTPM: 26.5
RHH5203_R3574
43.5
RHH5231_R3603
41.4
RHH5260_R3632
26.5
RHH5289_R3661
47.5
MAIT T-cell nTPM: 39.0
Samples: 4
Max nTPM: 57.1
Min nTPM: 24.3
RHH5233_R3605
57.1
RHH5205_R3576
35.4
RHH5262_R3634
24.3
RHH5297_R3663
39.2
Memory CD4 T-cell TFH nTPM: 47.2
Samples: 4
Max nTPM: 55.6
Min nTPM: 31.6
RHH5300_R3666
47.0
RHH5236_R3608
55.6
RHH5265_R3637
31.6
RHH5208_R3579
54.7
Memory CD4 T-cell Th1 nTPM: 34.7
Samples: 4
Max nTPM: 39.1
Min nTPM: 24.7
RHH5210_R3581
37.3
RHH5302_R3668
37.7
RHH5238_R3610
39.1
RHH5267_R3639
24.7
Memory CD4 T-cell Th1/Th17 nTPM: 32.0
Samples: 4
Max nTPM: 45.6
Min nTPM: 21.4
RHH5303_R3669
45.6
RHH5211_R3582
35.0
RHH5239_R3611
25.8
RHH5268_R3640
21.4
Memory CD4 T-cell Th17 nTPM: 28.3
Samples: 4
Max nTPM: 39.2
Min nTPM: 16.7
RHH5304_R3670
25.5
RHH5212_R3583
39.2
RHH5240_R3612
31.9
RHH5269_R3641
16.7
Memory CD4 T-cell Th2 nTPM: 39.4
Samples: 4
Max nTPM: 58.1
Min nTPM: 30.8
RHH5305_R3671
30.8
RHH5213_R3584
34.9
RHH5241_R3613
58.1
RHH5270_R3642
33.7
Naive CD4 T-cell nTPM: 32.6
Samples: 4
Max nTPM: 39.0
Min nTPM: 27.9
RHH5306_R3672
34.3
RHH5214_R3585
29.0
RHH5242_R3614
39.0
RHH5271_R3643
27.9
Naive CD8 T-cell nTPM: 29.2
Samples: 4
Max nTPM: 36.9
Min nTPM: 11.7
RHH5201_R3572
34.0
RHH5229_R3601
11.7
RHH5258_R3630
36.9
RHH5287_R3659
34.2
Non-Vd2 gdTCR nTPM: 47.5
Samples: 4
Max nTPM: 69.3
Min nTPM: 25.0
RHH5235_R3607
25.0
RHH5264_R3636
50.5
RHH5207_R3578
45.1
RHH5299_R3665
69.3
T-reg nTPM: 30.4
Samples: 4
Max nTPM: 41.5
Min nTPM: 19.4
RHH5301_R3667
41.5
RHH5237_R3609
30.5
RHH5266_R3638
19.4
RHH5209_R3580
30.0
Terminal effector memory CD4 T-cell nTPM: 35.8
Samples: 2
Max nTPM: 43.7
Min nTPM: 27.9
RHH5243_R3615
27.9
RHH5272_R3644
43.7
Terminal effector memory CD8 T-cell nTPM: 55.1
Samples: 4
Max nTPM: 76.0
Min nTPM: 26.8
RHH5232_R3604
53.6
RHH5204_R3575
76.0
RHH5261_R3633
26.8
RHH5296_R3662
63.9
Vd2 gdTCR nTPM: 46.4
Samples: 4
Max nTPM: 67.7
Min nTPM: 29.6
RHH5234_R3606
31.3
RHH5206_R3577
67.7
RHH5263_R3635
29.6
RHH5298_R3664
57.0
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
