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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
18.2
nTPM
Monaco:
108.7
nTPM
Schmiedel:
225.0
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
18.2
HPA sample
nTPM
gdT-cell nTPM: 13.8
Samples: 6
Max nTPM: 16.3
Min nTPM: 10.8
P10809_1007
14.3
P10809_1022
15.9
P10809_1041
16.3
P10809_1060
10.8
P10809_1077
12.9
P10809_1098
12.7
MAIT T-cell nTPM: 18.2
Samples: 6
Max nTPM: 27.1
Min nTPM: 12.0
P10809_1006
27.1
P10809_1024
26.4
P10809_1043
17.0
P10809_1062
14.3
P10809_1083
12.0
P10809_1097
12.5
Memory CD4 T-cell nTPM: 12.9
Samples: 6
Max nTPM: 17.7
Min nTPM: 8.8
P10809_1014
13.1
P10809_1026
8.8
P10809_1045
17.7
P10809_1064
12.4
P10809_1086
12.5
P10809_1113
13.0
Memory CD8 T-cell nTPM: 13.9
Samples: 5
Max nTPM: 16.2
Min nTPM: 11.6
P10809_1012
16.2
P10809_1027
14.0
P10809_1046
15.7
P10809_1065
12.2
P10809_1111
11.6
Naive CD4 T-cell nTPM: 12.2
Samples: 6
Max nTPM: 18.2
Min nTPM: 9.5
P10809_1015
13.3
P10809_1030
10.3
P10809_1049
10.4
P10809_1068
18.2
P10809_1085
9.5
P10809_1112
11.2
Naive CD8 T-cell nTPM: 12.7
Samples: 6
Max nTPM: 18.8
Min nTPM: 10.4
P10809_1016
12.0
P10809_1031
10.8
P10809_1050
11.3
P10809_1069
18.8
P10809_1087
10.4
P10809_1110
12.6
T-reg nTPM: 15.5
Samples: 6
Max nTPM: 22.9
Min nTPM: 9.8
P10809_1018
18.6
P10809_1037
12.0
P10809_1056
11.5
P10809_1075
18.2
P10809_1094
22.9
P10809_1106
9.8
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
108.7
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 90.6
Samples: 4
Max nTPM: 100.0
Min nTPM: 69.9
RHH5202_R3573
96.1
RHH5230_R3602
96.4
RHH5259_R3631
69.9
RHH5288_R3660
100.0
Effector memory CD8 T-cell nTPM: 108.7
Samples: 4
Max nTPM: 137.5
Min nTPM: 98.6
RHH5203_R3574
137.5
RHH5231_R3603
99.7
RHH5260_R3632
98.6
RHH5289_R3661
98.8
MAIT T-cell nTPM: 94.7
Samples: 4
Max nTPM: 111.1
Min nTPM: 74.3
RHH5233_R3605
102.1
RHH5205_R3576
111.1
RHH5262_R3634
74.3
RHH5297_R3663
91.4
Memory CD4 T-cell TFH nTPM: 97.5
Samples: 4
Max nTPM: 133.6
Min nTPM: 73.1
RHH5300_R3666
73.1
RHH5236_R3608
84.7
RHH5265_R3637
98.5
RHH5208_R3579
133.6
Memory CD4 T-cell Th1 nTPM: 93.7
Samples: 4
Max nTPM: 117.2
Min nTPM: 78.6
RHH5210_R3581
90.9
RHH5302_R3668
78.6
RHH5238_R3610
117.2
RHH5267_R3639
88.0
Memory CD4 T-cell Th1/Th17 nTPM: 100.1
Samples: 4
Max nTPM: 145.7
Min nTPM: 77.0
RHH5303_R3669
87.7
RHH5211_R3582
90.1
RHH5239_R3611
145.7
RHH5268_R3640
77.0
Memory CD4 T-cell Th17 nTPM: 100.0
Samples: 4
Max nTPM: 136.5
Min nTPM: 70.2
RHH5304_R3670
70.2
RHH5212_R3583
88.5
RHH5240_R3612
136.5
RHH5269_R3641
104.9
Memory CD4 T-cell Th2 nTPM: 88.5
Samples: 4
Max nTPM: 95.2
Min nTPM: 78.5
RHH5305_R3671
86.4
RHH5213_R3584
95.2
RHH5241_R3613
93.7
RHH5270_R3642
78.5
Naive CD4 T-cell nTPM: 74.8
Samples: 4
Max nTPM: 90.9
Min nTPM: 59.8
RHH5306_R3672
69.9
RHH5214_R3585
59.8
RHH5242_R3614
90.9
RHH5271_R3643
78.7
Naive CD8 T-cell nTPM: 80.6
Samples: 4
Max nTPM: 107.1
Min nTPM: 64.0
RHH5201_R3572
72.4
RHH5229_R3601
107.1
RHH5258_R3630
64.0
RHH5287_R3659
78.7
Non-Vd2 gdTCR nTPM: 99.0
Samples: 4
Max nTPM: 113.0
Min nTPM: 86.9
RHH5235_R3607
113.0
RHH5264_R3636
86.9
RHH5207_R3578
103.0
RHH5299_R3665
92.9
T-reg nTPM: 93.0
Samples: 4
Max nTPM: 114.9
Min nTPM: 73.4
RHH5301_R3667
73.4
RHH5237_R3609
114.9
RHH5266_R3638
87.0
RHH5209_R3580
96.6
Terminal effector memory CD4 T-cell nTPM: 99.9
Samples: 2
Max nTPM: 102.0
Min nTPM: 97.8
RHH5243_R3615
97.8
RHH5272_R3644
102.0
Terminal effector memory CD8 T-cell nTPM: 105.0
Samples: 4
Max nTPM: 112.6
Min nTPM: 100.6
RHH5232_R3604
103.8
RHH5204_R3575
100.6
RHH5261_R3633
102.8
RHH5296_R3662
112.6
Vd2 gdTCR nTPM: 82.3
Samples: 4
Max nTPM: 109.1
Min nTPM: 58.6
RHH5234_R3606
76.2
RHH5206_R3577
85.1
RHH5263_R3635
109.1
RHH5298_R3664
58.6
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
