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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
19.0
nTPM
Monaco:
22.7
nTPM
Schmiedel:
81.9
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
19.0
HPA sample
nTPM
gdT-cell nTPM: 9.8
Samples: 6
Max nTPM: 16.8
Min nTPM: 5.4
P10809_1007
7.9
P10809_1022
16.8
P10809_1041
8.5
P10809_1060
9.7
P10809_1077
5.4
P10809_1098
10.7
MAIT T-cell nTPM: 12.2
Samples: 6
Max nTPM: 18.6
Min nTPM: 9.5
P10809_1006
12.7
P10809_1024
18.6
P10809_1043
9.8
P10809_1062
12.1
P10809_1083
9.5
P10809_1097
10.6
Memory CD4 T-cell nTPM: 13.7
Samples: 6
Max nTPM: 19.0
Min nTPM: 9.5
P10809_1014
13.6
P10809_1026
17.8
P10809_1045
19.0
P10809_1064
9.5
P10809_1086
12.3
P10809_1113
10.0
Memory CD8 T-cell nTPM: 15.9
Samples: 5
Max nTPM: 20.1
Min nTPM: 12.1
P10809_1012
14.6
P10809_1027
18.8
P10809_1046
20.1
P10809_1065
12.1
P10809_1111
14.1
Naive CD4 T-cell nTPM: 19.0
Samples: 6
Max nTPM: 30.8
Min nTPM: 12.3
P10809_1015
15.6
P10809_1030
20.0
P10809_1049
30.8
P10809_1068
21.2
P10809_1085
12.3
P10809_1112
14.0
Naive CD8 T-cell nTPM: 17.3
Samples: 6
Max nTPM: 25.6
Min nTPM: 9.1
P10809_1016
20.1
P10809_1031
25.6
P10809_1050
20.5
P10809_1069
17.4
P10809_1087
9.1
P10809_1110
10.8
T-reg nTPM: 10.0
Samples: 6
Max nTPM: 19.8
Min nTPM: 4.4
P10809_1018
4.6
P10809_1037
18.2
P10809_1056
19.8
P10809_1075
4.4
P10809_1094
7.4
P10809_1106
5.6
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
22.7
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 9.7
Samples: 4
Max nTPM: 15.8
Min nTPM: 4.8
RHH5202_R3573
5.0
RHH5230_R3602
4.8
RHH5259_R3631
13.2
RHH5288_R3660
15.8
Effector memory CD8 T-cell nTPM: 20.7
Samples: 4
Max nTPM: 24.9
Min nTPM: 17.2
RHH5203_R3574
17.2
RHH5231_R3603
24.9
RHH5260_R3632
20.2
RHH5289_R3661
20.4
MAIT T-cell nTPM: 22.7
Samples: 4
Max nTPM: 34.1
Min nTPM: 15.5
RHH5233_R3605
22.9
RHH5205_R3576
34.1
RHH5262_R3634
18.1
RHH5297_R3663
15.5
Memory CD4 T-cell TFH nTPM: 9.8
Samples: 4
Max nTPM: 18.7
Min nTPM: 5.0
RHH5300_R3666
8.6
RHH5236_R3608
18.7
RHH5265_R3637
6.7
RHH5208_R3579
5.0
Memory CD4 T-cell Th1 nTPM: 12.0
Samples: 4
Max nTPM: 18.7
Min nTPM: 7.3
RHH5210_R3581
12.6
RHH5302_R3668
7.3
RHH5238_R3610
18.7
RHH5267_R3639
9.2
Memory CD4 T-cell Th1/Th17 nTPM: 19.5
Samples: 4
Max nTPM: 24.4
Min nTPM: 14.2
RHH5303_R3669
19.0
RHH5211_R3582
14.2
RHH5239_R3611
24.4
RHH5268_R3640
20.3
Memory CD4 T-cell Th17 nTPM: 10.1
Samples: 4
Max nTPM: 12.6
Min nTPM: 6.7
RHH5304_R3670
8.6
RHH5212_R3583
12.3
RHH5240_R3612
6.7
RHH5269_R3641
12.6
Memory CD4 T-cell Th2 nTPM: 12.7
Samples: 4
Max nTPM: 19.4
Min nTPM: 4.7
RHH5305_R3671
8.5
RHH5213_R3584
18.1
RHH5241_R3613
4.7
RHH5270_R3642
19.4
Naive CD4 T-cell nTPM: 22.7
Samples: 4
Max nTPM: 28.7
Min nTPM: 9.9
RHH5306_R3672
26.2
RHH5214_R3585
28.7
RHH5242_R3614
9.9
RHH5271_R3643
26.0
Naive CD8 T-cell nTPM: 18.3
Samples: 4
Max nTPM: 26.5
Min nTPM: 10.5
RHH5201_R3572
18.3
RHH5229_R3601
10.5
RHH5258_R3630
17.7
RHH5287_R3659
26.5
Non-Vd2 gdTCR nTPM: 10.8
Samples: 4
Max nTPM: 17.8
Min nTPM: 3.2
RHH5235_R3607
3.2
RHH5264_R3636
7.0
RHH5207_R3578
17.8
RHH5299_R3665
15.3
T-reg nTPM: 13.5
Samples: 4
Max nTPM: 22.6
Min nTPM: 2.3
RHH5301_R3667
6.7
RHH5237_R3609
22.6
RHH5266_R3638
22.4
RHH5209_R3580
2.3
Terminal effector memory CD4 T-cell nTPM: 8.7
Samples: 2
Max nTPM: 10.0
Min nTPM: 7.3
RHH5243_R3615
7.3
RHH5272_R3644
10.0
Terminal effector memory CD8 T-cell nTPM: 14.2
Samples: 4
Max nTPM: 28.1
Min nTPM: 5.5
RHH5232_R3604
11.0
RHH5204_R3575
5.5
RHH5261_R3633
28.1
RHH5296_R3662
12.3
Vd2 gdTCR nTPM: 16.6
Samples: 4
Max nTPM: 23.4
Min nTPM: 12.2
RHH5234_R3606
23.4
RHH5206_R3577
15.4
RHH5263_R3635
12.2
RHH5298_R3664
15.3
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
